Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
59841c13-ab79-46ba-94bd-12b01e61e708
Homo sapiens
|
8'643 cells x 32'383 genes |
h5ad
88.1 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
899e2906-cdb1-4dcc-8dd8-3e3fead6c910
Mus musculus
|
8'647 cells x 30'198 genes |
h5ad
107 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7a419302-772d-4534-bffe-763c95b8c63d
Homo sapiens
|
8'653 cells x 35'477 genes |
h5ad
90.5 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1406
Mus musculus
|
8'657 cells x 27'640 genes |
counts_table
553 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d42cadbf-b907-49dc-9565-fedba8fccedc
Homo sapiens
|
8'678 cells x 35'477 genes |
h5ad
117 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-175929
Danio rerio
|
8'701 cells |
h5ad
159 MB
|
Not in ASAP | Details |
|
hca
sc
|
dcbb50d1-9acf-4f70-9fda-b1f63a948c49::3c4a0119-dac5-433f-af38-dbfdfceb0eea
Homo sapiens
|
8'710 cells |
h5ad
39.7 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7432b873-1e96-4a8a-b97b-8921937f4afe
Homo sapiens
|
8'715 cells x 15'221 genes |
h5ad
32.1 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
26a5867a-906d-4753-a186-e3878ed91c6a
Mus musculus
|
8'720 cells x 29'286 genes |
h5ad
25.3 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f54647ec-0c03-4775-8dac-5a477c10a3f5
Homo sapiens
|
8'753 cells x 19'517 genes |
h5ad
55.2 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-6505
Homo sapiens
|
8'778 cells |
h5ad
245 MB
|
Not in ASAP | Details |
|
hca
sc
|
9d97f01f-9313-416e-9b07-560f048b2350::65c905b7-34ea-423b-9e0c-e3f3c6ae1e4b
Homo sapiens
|
8'779 cells |
h5
22.7 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b02891d3-cff8-457e-928c-c483e5d93e69
Mus musculus
|
8'804 cells x 29'286 genes |
h5ad
17.1 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2db80173-2bbb-499c-9161-dff672eb12e9
Homo sapiens
|
8'811 cells x 32'624 genes |
h5ad
96.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2b1a5c88-74d2-4dd9-95bc-c26c0e4b5475
Mus musculus
|
8'847 cells x 29'286 genes |
h5ad
28.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8d8411b2-eb8c-4d8b-9cf1-c605de44d1e6
Mus musculus
|
8'863 cells x 30'198 genes |
h5ad
113 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
77230e22-f723-40f8-a16d-278671d90f55
Mus musculus
|
8'899 cells x 29'286 genes |
h5ad
33.3 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
93966790-bbfa-420f-aa85-bc5ca51d9c96
Mus musculus
|
8'945 cells x 17'943 genes |
h5ad
181 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-9689
Homo sapiens
|
8'951 cells |
h5ad
255 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8775a6c6-b960-43ae-9f76-45c4acda3621
Homo sapiens
|
8'959 cells x 58'226 genes |
h5ad
24.4 MB
|
Not in ASAP | Details |
|
hca
sc
|
08fb10df-32e5-456c-9882-e33fcd49077a::427d7360-27c5-403b-b5af-18c982145b95
Homo sapiens
|
8'972 cells |
h5
25.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
343ff97c-85df-494b-8400-beb937618611
Homo sapiens
|
8'978 cells x 35'469 genes |
h5ad
162 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a41202e6-173c-477c-8b4d-e0688ee1c4cb
Homo sapiens
|
8'982 cells x 32'383 genes |
h5ad
77.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
03d5794d-cde9-4769-a1a9-b3899d2b1d87
Homo sapiens
|
9'015 cells x 32'383 genes |
h5ad
43.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7b75b2c4-6d99-40be-9a61-391455d859e6
Homo sapiens
|
9'070 cells x 32'040 genes |
h5ad
55.6 MB
|
Not in ASAP | Details |