Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
ebi_sc
sc
|
E-GEOD-158761
Arabidopsis thaliana
|
9'090 cells |
h5ad
168 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-CURD-82
Oryza sativa Indica Group
|
9'093 cells |
h5ad
131 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e8a11a27-9c47-4673-b65d-11b9cd6065e1
Homo sapiens
|
9'096 cells x 22'385 genes |
h5ad
165 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
54da2ee9-19f8-4e84-bf9f-5c763e6705a0
Danio rerio
|
9'110 cells x 32'031 genes |
h5ad
13 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
531c9543-9093-45ed-93ac-ebc5815bfb8a
Homo sapiens
|
9'156 cells x 58'232 genes |
h5ad
47.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f67f2cfa-ba45-4f77-8e26-64a15f666043
Homo sapiens
|
9'203 cells x 35'483 genes |
h5ad
228 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6b33f0b2-90b4-4882-9a92-5af518bea2f5
Mus musculus
|
9'249 cells x 30'146 genes |
h5ad
99.7 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
cb119d3c-07e4-48c5-8710-8e2f615a34ab
Callithrix jacchus
|
9'257 cells x 14'409 genes |
h5ad
66.3 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b4f2c50e-080f-4d37-aa21-911d2273b0da
Homo sapiens
|
9'263 cells x 35'377 genes |
h5ad
79.2 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-HCAD-23
Homo sapiens
|
9'267 cells |
h5ad
202 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6e4f871d-fd7c-4909-8c14-e4c9957c2e8f
Mus musculus
|
9'275 cells x 17'943 genes |
h5ad
125 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP589
|
9'278 cells x 21'271 genes |
counts_table
100 MB
|
Not in ASAP | Details |
|
hca
sc
|
cc95ff89-2e68-4a08-a234-480eca21ce79::23ef5529-20dc-45bc-a1c8-9d85ea523ab6
Homo sapiens
|
9'278 cells |
h5ad
66.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f43f70fc-0aa9-493e-8e5a-5649f090d433
Homo sapiens
|
9'286 cells x 32'397 genes |
h5ad
71 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
eeacb0c1-2217-4cf6-b8ce-1f0fedf1b569
Homo sapiens
|
9'337 cells x 32'393 genes |
h5ad
120 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
95498b77-1bec-4298-8745-c24af1069917
Homo sapiens
|
9'354 cells x 18'063 genes |
h5ad
88.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
48b55b2b-c6a3-4288-a09e-e01e5078c678
Homo sapiens
|
9'362 cells x 16'055 genes |
h5ad
63.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e04daea4-4412-45b5-989e-76a9be070a89
Homo sapiens
|
9'409 cells x 53'514 genes |
h5ad
178 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e06e9bf3-81ef-434d-bc86-08ec1266b155
Homo sapiens
|
9'422 cells x 17'717 genes |
h5ad
36.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4ce8d8ec-b94c-4b79-afcb-b094336d8a78
Homo sapiens
|
9'422 cells x 32'596 genes |
h5ad
74.1 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0eccaf0c-19d2-4900-9962-899378adf8be
Homo sapiens
|
9'446 cells x 35'483 genes |
h5ad
366 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b15ec081-fd6e-4a1f-93a5-d5952c5eb8f8
Mus musculus
|
9'454 cells x 29'286 genes |
h5ad
17.2 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f1f123cc-ca2c-460f-b7f1-88240efb1e82
Homo sapiens
|
9'471 cells x 30'172 genes |
h5ad
99.2 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-CURD-56
Drosophila melanogaster
|
9'471 cells |
h5ad
202 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5106ea1a-947c-4a51-b29f-9db107392588
Mus musculus
|
9'563 cells x 21'137 genes |
h5ad
110 MB
|
Not in ASAP | Details |