Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
a6347c54-9e69-45e4-b1db-f5d84aa8321a
Homo sapiens
|
11'484 cells x 15'705 genes |
h5ad
59.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c62ac8e5-72d1-48d1-8bb5-9e66fd2b1e19
Mus musculus
|
11'510 cells x 20'086 genes |
h5ad
10.2 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2708
Mus musculus
|
11'511 cells x 6'786 genes |
h5ad
742 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
db59611b-42de-4035-93aa-1ed39f38b467
Homo sapiens
|
11'574 cells x 32'393 genes |
h5ad
118 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d1519e1d-9471-499b-bb4d-6bc51275a03f
Mus musculus
|
11'608 cells x 29'286 genes |
h5ad
34.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
aad97cb5-f375-45ef-ae9d-178e7f5d5180
Homo sapiens
|
11'617 cells x 30'172 genes |
h5ad
769 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
258c733f-4eb9-4d1d-b9fa-0d09e5c80787
Mus musculus
|
11'730 cells x 29'286 genes |
h5ad
31.3 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-6487
Mus musculus
|
11'736 cells |
h5ad
234 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9cb9eaa8-cccf-41cd-995e-77c0993a287b
Mus musculus
|
11'756 cells x 29'286 genes |
h5ad
28.8 MB
|
Not in ASAP | Details |
|
matkp
sc
|
SingleCell_Li2022_Mouse_SCP708_WC_EPI
Mus musculus
|
11'828 cells |
zip
34.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9c5f68fc-860f-414b-99c2-cc6be691aff3
Homo sapiens
|
11'851 cells x 15'517 genes |
h5ad
36.4 MB
|
Not in ASAP | Details |
|
matkp
sc
|
snRNA_Holman2023_Mouse
Mus musculus
|
11'856 cells |
zip
96.3 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-10628
Drosophila melanogaster
|
11'899 cells |
h5ad
150 MB
|
Not in ASAP | Details |
|
hca
sc
|
b91c623b-1945-4727-b167-0a93027b0d3f::67132a42-7184-4b0f-bb83-f2f7c2be6375
Homo sapiens
|
11'900 cells |
h5
29.7 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
09439621-02d4-4d44-a3a1-1d8b61d93be0
Danio rerio
|
11'964 cells x 32'031 genes |
h5ad
14.7 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-8312
Mus musculus
|
12'056 cells |
h5ad
404 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e04cb7d9-7487-4bf7-99db-b16f236a351a
Mus musculus
|
12'118 cells x 30'198 genes |
h5ad
1.06 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c44e22ae-b746-4c09-9826-ca0650e828d4
Mus musculus
|
12'132 cells x 19'591 genes |
h5ad
12.3 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
54ea5aba-3413-4c6b-a925-b4f1635d6580
Homo sapiens
|
12'162 cells x 35'459 genes |
h5ad
107 MB
|
Not in ASAP | Details |
|
hca
sc
|
e5fe8274-3769-4d7d-aa35-6d33c226ab43::10ce93a3-40eb-43cc-89ed-961a9240b8d7
Homo sapiens
|
12'185 cells |
h5
30.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
99efb290-fbe3-4739-909d-859e058f54aa
Homo sapiens
|
12'205 cells x 35'477 genes |
h5ad
165 MB
|
Not in ASAP | Details |
|
hca
sc
|
e5fe8274-3769-4d7d-aa35-6d33c226ab43::497b3aab-0f9b-401c-bc54-6d0a40c59db9
Homo sapiens
|
12'237 cells |
h5
51.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
71513028-e4a0-4c62-a435-16598791690a
Homo sapiens
|
12'258 cells x 25'873 genes |
h5ad
144 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1049
|
12'280 cells |
counts_table
295 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7c6091da-4606-44c7-a2c4-ef896de09e28
Mus musculus
|
12'295 cells x 17'943 genes |
h5ad
171 MB
|
Not in ASAP | Details |