Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
broad_scp
sc
|
SCP3024
Mus musculus
|
12'929 cells x 32'285 genes |
counts_table
798 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP3003
Mus musculus
|
12'929 cells x 32'285 genes |
counts_table
798 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
364348b4-bc34-4fe1-a851-60d99e36cafa
Homo sapiens
|
12'944 cells x 58'232 genes |
h5ad
120 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2dd9d7a2-4bee-4c3f-a1f5-89bc3271c4f0
Homo sapiens
|
12'964 cells x 35'459 genes |
h5ad
186 MB
|
Not in ASAP | Details |
|
hca
sc
|
c0518445-3b3b-49c6-b8fc-c41daa4eacba::f3aecaf2-700c-439d-a87a-8c78cd2cdd65
Homo sapiens
|
12'971 cells |
h5ad
231 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
49737a69-59bd-4e3d-94ab-515b51e79698
Mus musculus
|
13'068 cells x 29'286 genes |
h5ad
34.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
774046fb-9073-4356-af43-1362c10a2bcb
Mus musculus
|
13'080 cells x 29'286 genes |
h5ad
36 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-10231
Ovis aries
|
13'106 cells |
h5ad
256 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
787fe1f7-0851-4dc1-a2e7-74f2b0079168
Mus musculus
|
13'120 cells x 29'286 genes |
h5ad
33 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5c451b91-eb50-47f9-a268-467018a09023
Homo sapiens
|
13'147 cells x 22'199 genes |
h5ad
18.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
12c3efd8-d515-42e6-b93c-4961e599d524
Homo sapiens
|
13'161 cells x 35'459 genes |
h5ad
272 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c05fb583-eb2f-4e3a-8e74-f9bd6414e418
Homo sapiens
|
13'165 cells x 29'839 genes |
h5ad
116 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2dd73feb-0527-47d5-8c7b-35b6de16aecb
Homo sapiens
|
13'167 cells x 18'137 genes |
h5ad
54 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
40569510-2282-461b-84df-6218ef208e0e
Homo sapiens
|
13'173 cells x 58'232 genes |
h5ad
182 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-134722
Drosophila melanogaster
|
13'201 cells |
h5ad
272 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-157202
Drosophila melanogaster
|
13'210 cells |
h5ad
214 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP60
|
13'313 cells x 17'308 genes |
counts_table
120 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP345
|
13'316 cells x 21'814 genes |
counts_table
33.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8f67108f-1f78-4148-a14a-bff85c58f19b
Microcebus murinus
|
13'318 cells x 16'400 genes |
h5ad
91.5 MB
|
Details | |
|
hca
sc
|
e5fe8274-3769-4d7d-aa35-6d33c226ab43::be52b04f-79d9-4b1a-b44b-b99248ea0545
Homo sapiens
|
13'330 cells |
h5
38.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e9f98f53-5954-4e13-b4ee-93ca8d27243c
Mus musculus
|
13'372 cells x 29'286 genes |
h5ad
45.4 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-10196
Mus musculus
|
13'378 cells |
h5ad
386 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b8681124-aabf-4904-b9c9-66d834bf5bba
Homo sapiens
|
13'382 cells x 58'232 genes |
h5ad
184 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c08f8441-4a10-4748-872a-e70c0bcccdba
Mus musculus
|
13'417 cells x 21'025 genes |
h5ad
212 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1549
Danio rerio
|
13'507 cells x 27'866 genes |
rds
45.9 MB
|
Not in ASAP | Details |