Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
7aca1b0a-ea94-4a32-b011-e7467a8a75ef
Mus musculus
|
16'818 cells x 20'370 genes |
h5ad
14.3 MB
|
Not in ASAP | Details |
|
hca
sc
|
c0518445-3b3b-49c6-b8fc-c41daa4eacba::477218b6-b8ff-41e0-851e-60649a290917
Homo sapiens
|
16'873 cells |
h5ad
402 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0fdb6122-4600-40f0-a703-2da47cc7080d
Homo sapiens
|
16'878 cells x 32'383 genes |
h5ad
68.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d7d7e89c-c93a-422d-8958-9b4a90b69558
Homo sapiens
|
16'901 cells x 17'597 genes |
h5ad
138 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
52069da9-5f98-4ae3-8b2f-514afe3ca00f
Mus musculus
|
16'931 cells x 27'368 genes |
h5ad
87.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f9a73f33-3259-4af0-b95d-528ef4e0f2ee
Callithrix jacchus
|
16'944 cells x 12'150 genes |
h5ad
188 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5936d5c6-faba-46e8-93eb-c5d67d534612
Callithrix jacchus
|
16'956 cells x 12'643 genes |
h5ad
213 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-125970
Homo sapiens
|
17'021 cells |
h5ad
568 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9a00b374-20f8-4ba6-89f2-767d8fbef1da
Mus musculus
|
17'029 cells x 29'286 genes |
h5ad
45 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-10553
Homo sapiens
|
17'123 cells |
h5ad
447 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5e73d977-8e54-4406-a5f0-711bf0d3c228
Mus musculus
|
17'138 cells x 20'707 genes |
h5ad
9.95 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-9906
Homo sapiens
|
17'193 cells |
h5ad
567 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
3241c34f-581a-4de3-81fe-28e3de182680
Homo sapiens
|
17'308 cells x 35'477 genes |
h5ad
143 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1404
Mus musculus
|
17'331 cells x 27'082 genes |
counts_table
1.01 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f9f63905-34b2-4c61-b747-1df6c7a35a6a
Mus musculus
|
17'363 cells x 19'299 genes |
h5ad
11.4 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2151
Homo sapiens
|
17'375 cells x 16'880 genes |
h5ad
819 MB
|
Not in ASAP | Details |
|
hca
sc
|
b91c623b-1945-4727-b167-0a93027b0d3f::4fc4156f-380b-4f69-a1ac-89a8c900e02a
Homo sapiens
|
17'384 cells |
h5
30.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8fcf0ccc-67b2-43a3-90be-075f85169bef
Homo sapiens
|
17'451 cells x 20'893 genes |
h5ad
130 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2038
Mus musculus
|
17'512 cells x 32'454 genes |
h5ad
260 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9038a71d-81a7-4bc7-82c2-186c26d5c3d6
Homo sapiens
|
17'528 cells x 32'375 genes |
h5ad
136 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8039c63d-08b0-4fc9-af0f-5b57f08ca0da
Homo sapiens
|
17'535 cells x 58'232 genes |
h5ad
92.7 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
cb98738b-754d-4730-8cb5-00517f10fbdb
Mus musculus
|
17'586 cells x 27'368 genes |
h5ad
104 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
03168b24-5c11-4b2b-a027-d5f85246bddf
Mus musculus
|
17'587 cells x 29'286 genes |
h5ad
45.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
fe934662-dd0e-471d-b535-d61e1c49860d
Danio rerio
|
17'598 cells x 32'031 genes |
h5ad
19.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
02faf712-92d4-4589-bec7-13105059cf86
Homo sapiens
|
17'612 cells x 22'833 genes |
h5ad
14 MB
|
Not in ASAP | Details |