Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
2e342ea5-30e2-4149-b41e-e74f0ed5c72e
Mus musculus
|
17'613 cells x 27'368 genes |
h5ad
111 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
fd89be61-2869-4342-a86e-e1fce3a8f269
Homo sapiens
|
17'622 cells x 32'330 genes |
h5ad
254 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP879
|
17'627 cells x 27 genes |
counts_table
209 KB
|
Not in ASAP | Details |
|
cellxgene
sc
|
bbfd6ac8-7b26-4390-91fe-26d370ba3fcb
Mus musculus
|
17'628 cells x 27'368 genes |
h5ad
106 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
fbf173f9-f809-4d84-9b65-ae205d35b523
Homo sapiens
|
17'660 cells x 58'232 genes |
h5ad
134 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6ebb6e9b-efd0-4e02-a49a-4bf3c732203b
Homo sapiens
|
17'704 cells x 25'697 genes |
h5ad
25.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
83caa705-a765-4f99-9bf2-1d8b01674104
Homo sapiens
|
17'706 cells x 32'088 genes |
h5ad
161 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-10945
Mus musculus
|
17'745 cells |
h5ad
435 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
53ea4f06-0319-4b13-8e9d-e2581023aab7
Homo sapiens
|
17'777 cells x 25'228 genes |
h5ad
25.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0041b9c3-6a49-4bf7-8514-9bc7190067a7
Homo sapiens
|
17'786 cells x 60'606 genes |
h5ad
485 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
dc30c3ec-46d6-4cd8-8ec1-b544a3d0f503
Homo sapiens
|
17'799 cells x 20'110 genes |
h5ad
43.2 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
bb5f4b01-a8ea-47da-a6c7-3e71934d0f8e
Callithrix jacchus
|
17'891 cells x 12'670 genes |
h5ad
260 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4ebe33a1-c8ba-4238-9724-bd8b3a977521
Homo sapiens
|
17'909 cells x 24'157 genes |
h5ad
29 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP889
|
17'911 cells x 22 genes |
counts_table
539 KB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8dc29642-be06-46dc-a289-8075915745d4
Homo sapiens
|
17'962 cells x 22'808 genes |
h5ad
169 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
ed419b4e-db9b-40f1-8593-68fdf8dfb076
Homo sapiens
|
18'011 cells x 30'172 genes |
h5ad
1.34 GB
|
Not in ASAP | Details |
|
hca
sc
|
08fb10df-32e5-456c-9882-e33fcd49077a::2979f9ce-3826-4571-9ba9-dd864d4e4182
Homo sapiens
|
18'044 cells |
h5
29.4 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-8656
Mus musculus
|
18'085 cells |
h5ad
449 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8212b2bd-b6b1-4159-8c18-cbe3804aaa1f
Danio rerio
|
18'100 cells x 32'031 genes |
h5ad
23 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
607e7a20-f623-4150-93d5-b7ebc0af6fbf
Mus musculus
|
18'162 cells x 20'108 genes |
h5ad
15.4 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-10221
Mus musculus
|
18'186 cells |
h5ad
584 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP140
|
18'194 cells x 30'341 genes |
counts_table
255 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-7703
Mus musculus
|
18'264 cells |
h5ad
514 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
ee0b378d-d327-4c7d-baa6-28f062767c61
Mus musculus
|
18'297 cells x 27'368 genes |
h5ad
113 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP880
|
18'375 cells x 26 genes |
counts_table
97.3 KB
|
Not in ASAP | Details |