Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
broad_scp
sc
|
SCP3186
|
19'057 cells x 64'228 genes |
h5ad
6.19 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
ee0c577a-4fb0-491b-a89c-5ac3b4ebf3ed
Callithrix jacchus
|
19'113 cells x 12'681 genes |
h5ad
206 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
fb83600a-7823-426e-b06b-1fcd666a3cd8
Mus musculus
|
19'156 cells x 17'965 genes |
h5ad
5.75 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
ea251de5-c764-4f7c-add0-8141b1061faf
Homo sapiens
|
19'161 cells x 58'226 genes |
h5ad
212 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b8920ef5-7d22-497b-abca-a7a9eb76d79a
Homo sapiens
|
19'191 cells x 35'483 genes |
h5ad
787 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b6ee0939-b5b9-4e03-9d69-96fb6bf5d434
Homo sapiens
|
19'200 cells x 27'359 genes |
h5ad
431 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f854421b-d231-4231-9b23-fc3be7fbee45
Homo sapiens
|
19'317 cells x 32'375 genes |
h5ad
161 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
786753fc-05bc-49b7-b40c-62e6a6d0fc61
Danio rerio
|
19'325 cells x 32'031 genes |
h5ad
22.7 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-7316
Homo sapiens
|
19'350 cells |
h5ad
475 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
077b0429-0f47-48e0-879a-39eaae531d42
Homo sapiens
|
19'361 cells x 32'330 genes |
h5ad
114 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
02f8bb42-0322-4906-b9ad-b92a5ce73a2d
Homo sapiens
|
19'421 cells x 25'530 genes |
h5ad
27.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
3175b4f9-c2dd-43a4-972d-8c672e0a3d24
Mus musculus
|
19'471 cells x 19'698 genes |
h5ad
14.3 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP3022
Mus musculus
|
19'507 cells x 22'628 genes |
h5ad
275 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
179b00d1-14f5-48ca-8bd6-3a9c7b9e9737
Mus musculus
|
19'508 cells x 23'838 genes |
h5ad
288 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4cdd25a4-f4fa-4c13-b8a9-80cf28511d46
Homo sapiens
|
19'601 cells x 28'468 genes |
h5ad
170 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1792
Homo Sapiens
|
19'603 cells x 998 genes |
rds
11.3 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP3227
Homo sapiens
|
19'632 cells |
h5ad
1.5 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP872
|
19'659 cells x 22 genes |
counts_table
158 KB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d5c67a4e-a8d9-456d-a273-fa01adb1b308
Homo sapiens
|
19'694 cells x 36'475 genes |
h5ad
179 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4e374783-0152-423e-bcb6-b87cc232f64d
Homo sapiens
|
19'711 cells x 18'736 genes |
h5ad
1.68 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f15e263b-6544-46cb-a46e-e33ab7ce8347
Homo sapiens
|
19'722 cells x 20'399 genes |
h5ad
153 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1179
Mus musculus
|
19'724 cells x 13'869 genes |
counts_table
801 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
babbf9f3-f482-45a5-ba76-c41f4c2f503e
Homo sapiens
|
19'768 cells x 55'446 genes |
h5ad
237 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
31d8129f-1957-4888-8fad-69159a9e5e33
Mus musculus
|
19'781 cells x 27'368 genes |
h5ad
124 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a5ab6cde-46d4-4667-9b32-cfce54fa7a4e
Mus musculus
|
19'847 cells x 16'966 genes |
h5ad
277 MB
|
Not in ASAP | Details |