Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
d77ec7d6-ef2e-49d6-9e79-05b7f8881484
Homo sapiens
|
21'030 cells x 60'606 genes |
h5ad
858 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7178ec0a-b0e2-45b1-beb0-879bb69d81e9
Homo sapiens
|
21'049 cells x 27'898 genes |
h5ad
273 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
99c400af-2a21-4937-9b84-cc1e52f7ba09
Homo sapiens
|
21'054 cells x 25'560 genes |
h5ad
21.2 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c5ac9bb9-9597-4c0e-a985-1c3947288785
Mus musculus
|
21'181 cells x 19'032 genes |
h5ad
7.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
74c527f9-80c2-48bc-a262-88bca203a922
Homo sapiens
|
21'225 cells x 35'477 genes |
h5ad
223 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP3759
Mus musculus
|
21'256 cells x 19'054 genes |
rds
3.14 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
00e5dedd-b9b7-43be-8c28-b0e5c6414a62
Homo sapiens
|
21'422 cells x 30'172 genes |
h5ad
1.3 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e8ac3386-31d4-48ba-aa70-1bae0cf020e7
Homo sapiens
|
21'443 cells x 35'483 genes |
h5ad
517 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1a018108-b4b6-457b-ba15-046d5e98c169
Homo sapiens
|
21'534 cells x 58'232 genes |
h5ad
122 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-146122
Mus musculus
|
21'589 cells |
h5ad
768 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7970bd6b-f752-47a9-8643-2af16855ec49
Homo sapiens
|
21'595 cells x 19'517 genes |
h5ad
165 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b8c618e5-4b3d-4566-8a3f-7e40047f5c54
Mus musculus
|
21'647 cells x 17'943 genes |
h5ad
328 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-HCAD-11
Homo sapiens
|
21'664 cells |
h5ad
584 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b17a491e-0157-462e-b611-fdcde893d05d
Mus musculus
|
21'814 cells x 20'112 genes |
h5ad
17.2 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-HCAD-5
Homo sapiens
|
21'846 cells |
h5ad
744 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
eb602a88-fff3-488f-995d-3b0d967593b3
Mus musculus
|
21'894 cells x 19'534 genes |
h5ad
14.2 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2660
Homo sapiens
|
21'940 cells x 24'073 genes |
rds
698 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
12194ced-8086-458e-84a8-e2ab935d8db1
Homo sapiens
|
21'968 cells x 32'902 genes |
h5ad
205 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6ec405bb-4727-4c6d-ab4e-01fe489af7ea
Homo sapiens
|
22'029 cells x 60'606 genes |
h5ad
855 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
02aa7750-ed05-4eca-8061-766c68a81a22
Homo sapiens
|
22'033 cells x 17'478 genes |
h5ad
63.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2856d06c-0ff9-4e01-bfc9-202b74d0b60f
Homo sapiens
|
22'048 cells x 33'295 genes |
h5ad
294 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
db4a9ed2-e994-40c1-b7ec-4091fdf7b6c1
Sus scrofa domesticus
|
22'056 cells x 15'487 genes |
h5ad
266 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-10885
Homo sapiens
|
22'063 cells |
h5ad
671 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
fa49ae21-e7fc-42b6-ade3-a4c1bb6ad574
Mus musculus
|
22'066 cells x 31'729 genes |
h5ad
428 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a9f69075-aa4f-44f4-bb6b-07504ed450de
Microcebus murinus
|
22'067 cells x 16'400 genes |
h5ad
105 MB
|
Details |