External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Transcriptomic profiling by RNA-Seq of MCF-7 cells edited by CRISPR/Cas9 in t... GSE142562 Homo sapiens	2 samples	counts_table 171 KB	Not in ASAP	Details
geo bulk	RNA sequencing of Macaca mulatta prefrontal cortex after sevoflurane exposure GSE148437 Macaca mulatta	2 samples	counts_table 174 KB	Not in ASAP	Details
geo bulk	Mechanism of abnormal coagulation induced by tigecycline in cancers GSE198830 Cricetulus griseus	2 samples	counts_table 174 KB	Not in ASAP	Details
geo bulk	Overexpression of AIM2 inhibits metastasis and promotes apoptosis of hepatoce... GSE197179 Homo sapiens	2 samples	counts_table 175 KB	Not in ASAP	Details
geo bulk	Identification of RNAs containing TOP3B cleavage complexes GSE155996 Homo sapiens	2 samples	counts_table 175 KB	Not in ASAP	Details
geo bulk	Satellite cell – specific deletion of CIPC alleviates myopathy in mdx mice. GSE173558 Mus musculus	2 samples	counts_table 175 KB	Not in ASAP	Details
geo bulk	Next Generation Sequencing Facilitates Quantitative Analysis of VSV-stimulate... GSE138700 Mus musculus	2 samples	archive_table 180 KB	Not in ASAP	Details
geo bulk	Loss of CRY2 promotes regenerative myogenesis by enhancing PAX7 expression an... GSE171651 Mus musculus	2 samples	counts_table 181 KB	Not in ASAP	Details
geo bulk	Murine macrophages in mice infected with UTI GSE174734 Mus musculus	2 samples	counts_table 183 KB	Not in ASAP	Details
geo bulk	Human adipose tissue-derived mesenchymal progenitor cells induced toward adip... GSE204848 Homo sapiens	2 samples	counts_table 187 KB	Not in ASAP	Details
geo bulk	Microglial APOE3 Christchurch protects neurons from Tau pathology in a human ... GSE195638 Homo sapiens	2 samples	archive_table 190 KB	Not in ASAP	Details
geo bulk	Transcriptomic analysis of neuroblastoma cells in response to stable over-exp... GSE215748 Homo sapiens	2 samples	archive_table 190 KB	Not in ASAP	Details
geo bulk	Metabolic pathways that are essential for the progression of TNBC in vivo GSE217463 Mus musculus	2 samples	archive_table 190 KB	Not in ASAP	Details
geo bulk	LRG1 is an adipokine that mediates obesity-induced hepatosteatosis and insuli... GSE185483 Mus musculus	2 samples	archive_table 190 KB	Not in ASAP	Details
geo bulk	RNA-seq of sorted pancreatic endocrine progenitor cells GSE149889 Mus musculus	2 samples	archive_table 190 KB	Not in ASAP	Details
geo bulk	Epigenetic traits inscribed in chromatin accessibility in aged hematopoietic ... GSE162659 Mus musculus	2 samples	archive_table 190 KB	Not in ASAP	Details
geo bulk	TGF-b and Eomesodermin coordinate to maintain CD8+ regulatory T cells and lim... GSE125111 Mus musculus	2 samples	archive_table 190 KB	Not in ASAP	Details
geo bulk	Expression profile of human umbilical venous endothelial cells and human plur... GSE138104 Homo sapiens	2 samples	archive_table 190 KB	Not in ASAP	Details
geo bulk	Drug Repurposing: Therapeutic Role of Aripiprazole in the Cartilage Defect GSE271026 Homo sapiens	2 samples	archive_table 200 KB	Not in ASAP	Details
geo bulk	NINJ2 inhibition increased chemo-sensitivity by decreasing CICs in chemothera... GSE171054 Homo sapiens	2 samples	archive_table 200 KB	Not in ASAP	Details
geo bulk	Selective and brain-penetrant lanosterol synthase inhibitors target glioma st... GSE222971 Mus musculus	2 samples	archive_table 200 KB	Not in ASAP	Details
geo bulk	Lymphatic endothelial cell identity is controlled by a GATA2 bound enhancer [... GSE129633 Homo sapiens	2 samples	archive_table 200 KB	Not in ASAP	Details
geo bulk	Transcriptome of Knockdown Pspc1 in the MS1 pancreatic islet endothelial cell... GSE205995 Mus musculus	2 samples	archive_table 200 KB	Not in ASAP	Details
geo bulk	RNA-seq analyses of phase variation-dependent genes in Paenibacillus polymyxa... GSE93062 Paenibacillus polymyxa	2 samples	archive_table 200 KB	Not in ASAP	Details
geo bulk	Fermentation product with new equol-producing Lactobacillus paracasei as a pr... GSE122878 Lacticaseibacillus paracasei	2 samples	archive_table 200 KB	Not in ASAP	Details