Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
bc7260e0-54cf-4b0b-823d-93f5b850f757
Homo sapiens
|
22'125 cells x 32'040 genes |
h5ad
141 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1933
Mus musculus
|
22'155 cells x 18'772 genes |
counts_table
51.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0a1b0fc9-2167-4cd3-85c6-379f0fdab8be
Mus musculus
|
22'157 cells x 20'835 genes |
h5ad
19.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5ae6ab72-1927-4d5b-9826-86be65791293
Homo sapiens
|
22'168 cells x 35'483 genes |
h5ad
424 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP886
|
22'175 cells x 27 genes |
counts_table
258 KB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6384d8b8-8511-4ffb-b543-26dc8dd5967a
Homo sapiens
|
22'188 cells x 16'294 genes |
h5ad
48 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6d41668c-168c-4500-b06a-4674ccf3e19d
Homo sapiens
|
22'214 cells x 60'606 genes |
h5ad
796 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7a1d54e5-901d-4280-b77d-b87cf172292d
Homo sapiens
|
22'227 cells x 35'477 genes |
h5ad
247 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1489
Rattus norvegicus
|
22'288 cells x 16'558 genes |
counts_table
1.1 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4b83f213-b96b-4c87-a884-9b81faddb194
Homo sapiens
|
22'370 cells x 31'752 genes |
h5ad
109 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
28c696bb-9549-434b-9340-dc745a846f9a
Mus musculus
|
22'375 cells x 35'126 genes |
h5ad
1.26 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP495
|
22'397 cells x 36'296 genes |
counts_table
1.63 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
3e4e2c8e-cd17-4ece-9141-1e7f4ce8da1f
Homo sapiens
|
22'414 cells x 23'249 genes |
h5ad
111 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
230eeeee-5640-49ef-99a2-9d2fd001ea06
Mus musculus
|
22'430 cells x 20'582 genes |
h5ad
21.3 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1831d86a-0cdb-4a41-b410-6687370a4620
Mus musculus
|
22'458 cells x 20'150 genes |
h5ad
14.2 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8e47ed12-c658-4252-b126-381df8d52a3d
Homo sapiens
|
22'502 cells x 25'699 genes |
h5ad
202 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b627552d-c205-4ab3-b440-e08b3271d372
Homo sapiens
|
22'502 cells x 26'197 genes |
h5ad
47.1 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP3202
Mus musculus
|
22'609 cells x 14'830 genes |
h5ad
3.24 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
70fa6bd9-cc35-4779-9a05-fa8918c0ff8b
Mus musculus
|
22'659 cells x 18'340 genes |
h5ad
6.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d8732da6-8d1d-42d9-b625-f2416c30054b
Homo sapiens
|
22'671 cells x 60'606 genes |
h5ad
920 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
cda48edf-331d-4ada-96ea-104ccb3147dd
Homo sapiens
|
22'734 cells x 28'101 genes |
h5ad
154 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-134144
Homo sapiens
|
22'763 cells |
h5ad
591 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-9154
Homo sapiens
|
22'779 cells |
h5ad
903 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5f84ba14-4431-4d49-a88f-514cad5a30c8
Homo sapiens
|
22'852 cells x 23'922 genes |
h5ad
17.2 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a190b2e9-3796-4785-9a2f-013e2a9a43e6
Homo sapiens
|
22'891 cells x 35'483 genes |
h5ad
858 MB
|
Not in ASAP | Details |