Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
broad_scp
sc
|
SCP1570
Gallus gallus
|
26'971 cells x 17'557 genes |
rds
769 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-ANND-3
Homo sapiens
|
27'002 cells |
h5ad
2.8 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f425376b-bc86-44fd-936f-c43c0c64bf4f
Homo sapiens
|
27'036 cells x 24'867 genes |
h5ad
23.2 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a5939d1c-3f1d-4931-abf2-735d82fda26c
Mus musculus
|
27'044 cells x 20'452 genes |
h5ad
19.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
595c9010-99ec-462d-b6a1-2b2fe5407871
Homo sapiens
|
27'092 cells x 35'469 genes |
h5ad
311 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
25681e1c-a4f6-4948-aa5f-39d1f239f182
Homo sapiens
|
27'108 cells x 32'383 genes |
h5ad
278 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2ae39b65-06f8-4dd8-891f-efc68f39a1c6
Mus musculus
|
27'111 cells x 30'146 genes |
h5ad
1.65 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a7b4f565-691d-43ea-bf4a-d2d1d52bb4b4
Homo sapiens
|
27'111 cells x 58'232 genes |
h5ad
260 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4f1555bc-4664-46c3-a606-78d34dd10d92
Homo sapiens
|
27'112 cells x 60'606 genes |
h5ad
983 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP3355
Mus musculus
|
27'119 cells x 23'261 genes |
rds
1.11 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6c0b6bbf-faf4-4612-8823-a0908d31dbc9
Mus musculus
|
27'173 cells x 20'265 genes |
h5ad
18.3 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-10662
Homo sapiens
|
27'180 cells |
h5ad
1.2 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a51c6ece-5731-4128-8c1e-5060e80c69e4
Homo sapiens
|
27'197 cells x 31'998 genes |
h5ad
336 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d7dcfd8f-2ee7-4385-b9ac-e074c23ed190
Homo sapiens
|
27'197 cells x 32'088 genes |
h5ad
323 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
07b1d7c8-5c2e-42f7-9246-26f746cd6013
Homo sapiens
|
27'210 cells x 58'232 genes |
h5ad
190 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
707acde8-4e99-4e31-8da9-782ded87d136
Mus musculus
|
27'220 cells x 19'659 genes |
h5ad
11.3 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP3771
Mus musculus
|
27'226 cells x 32'285 genes |
rds
261 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b3327332-ad36-4f5d-b9a0-7e3a55606928
Danio rerio
|
27'338 cells x 32'031 genes |
h5ad
25.5 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1772
Mus musculus
|
27'362 cells x 14'462 genes |
rds
12.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d4f003d4-1e87-4301-84e6-8e01a69aa426
Mus musculus
|
27'429 cells x 20'177 genes |
h5ad
14.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5767c838-0d36-44bb-b025-a4dfe5cdd908
Mus musculus
|
27'479 cells x 21'482 genes |
h5ad
27.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6672ee00-8e76-4fa9-a54b-e238273d730b
Danio rerio
|
27'484 cells x 32'031 genes |
h5ad
34.8 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP3
|
27'499 cells x 13'166 genes |
counts_table
1.03 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2924
Mus musculus
|
27'505 cells x 23'509 genes |
h5ad
5.19 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
dd8d88d7-c56e-4d34-bb13-ace12ae4da87
Danio rerio
|
27'534 cells x 32'031 genes |
h5ad
24.6 MB
|
Not in ASAP | Details |