Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
broad_scp
sc
|
SCP1815
homo sapiens
|
33'206 cells x 16'762 genes |
rds
1.97 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0f9d1892-919a-4f51-8b95-0b50750da1e6
Homo sapiens
|
33'272 cells x 19'091 genes |
h5ad
138 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-9954
Mus musculus
|
33'377 cells |
h5ad
709 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
20980d73-7c53-4039-b852-b76a01566d5a
Homo sapiens
|
33'484 cells x 58'232 genes |
h5ad
357 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
07760522-707a-4a1c-8891-dbd1226d6b27
Homo sapiens
|
33'506 cells x 33'295 genes |
h5ad
222 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
64f4ad90-a422-400a-944d-4ce0f39594a7
Homo sapiens
|
33'641 cells x 58'232 genes |
h5ad
351 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP3175
Mus musculus
|
33'673 cells x 23'676 genes |
h5ad
368 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9372df2d-13d6-4fac-980b-919a5b7eb483
Homo sapiens
|
33'794 cells x 58'232 genes |
h5ad
299 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0b9fc518-7ee8-43ec-bfb0-f65c0af0ae82
Sus scrofa
|
33'932 cells x 25'731 genes |
h5ad
911 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
ca20e2ac-5676-4158-b5d0-0c2b15898b19
Homo sapiens
|
33'968 cells x 58'232 genes |
h5ad
131 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-CURD-112
Homo sapiens
|
34'015 cells |
h5ad
1 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a84face4-eb30-4f43-994f-c6a13a097808
Homo sapiens
|
34'078 cells x 58'232 genes |
h5ad
268 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d3bbb7e6-40df-4a4f-bfe0-49001bc06396
Microcebus murinus
|
34'084 cells x 16'400 genes |
h5ad
236 MB
|
Details | |
|
cellxgene
sc
|
a3db64f7-658b-414d-9374-d7b640704a6d
Mus musculus
|
34'093 cells x 20'604 genes |
h5ad
22.2 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-151346
Mus musculus
|
34'101 cells |
h5ad
692 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1196334f-a441-474a-95ee-400780941690
Homo sapiens
|
34'132 cells x 59'413 genes |
h5ad
385 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1469
drosophila melanogaster
|
34'203 cells x 10'686 genes |
counts_table
308 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2a156c92-c62f-4a51-b340-9df09caa589c
Homo sapiens
|
34'268 cells x 28'101 genes |
h5ad
234 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a0754256-f44b-4c4a-962c-a552e47d3fdc
Homo sapiens
|
34'273 cells x 60'606 genes |
h5ad
1.29 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2900
Oncorhynchus mykiss
|
34'277 cells x 42'239 genes |
h5ad
6.17 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f5be9ed2-5d41-4a52-91e4-4ff24ff84900
Homo sapiens
|
34'323 cells x 32'345 genes |
h5ad
252 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1288
Homo sapiens
|
34'326 cells x 32'718 genes |
counts_table
392 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b8bd5567-276b-4ddf-a615-6b25ac208910
Mus musculus
|
34'355 cells x 20'765 genes |
h5ad
23.2 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f5a04dff-d394-4023-8811-65494e8bb11d
Homo sapiens
|
34'416 cells x 58'232 genes |
h5ad
442 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f6d0baa0-bcda-4bb2-b494-9d933645bb70
Mus musculus
|
34'638 cells x 21'356 genes |
h5ad
34.9 MB
|
Not in ASAP | Details |