Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
2872f4b0-b171-46e2-abc6-befcf6de6306
Homo sapiens
|
41'650 cells x 18'753 genes |
h5ad
266 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
589fe605-6d49-4abe-bff8-1675511c689a
Homo sapiens
|
41'670 cells x 23'290 genes |
h5ad
600 MB
|
Not in ASAP | Details |
|
hca
sc
|
2f676143-80c2-4bc6-b7b4-2613fe0fadf0::06b4fe96-0cfd-4670-8c88-c53512306d00
Homo sapiens
|
41'888 cells |
h5ad
5.07 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
659f6e10-86fd-4b76-bc5e-34f9a09f1580
Mus musculus
|
41'958 cells x 30'146 genes |
h5ad
818 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP642
Macaca fascicularis
|
41'976 cells x 29'766 genes |
h5ad
5.15 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a357414d-2042-4eb5-95f0-c58604a18bdd
Homo sapiens
|
42'036 cells x 60'606 genes |
h5ad
1.68 GB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-155543
Drosophila melanogaster
|
42'086 cells |
h5ad
1.4 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1e517707-295a-408d-809c-5b1ed4dbeda4
Homo sapiens
|
42'114 cells x 38'361 genes |
h5ad
362 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
dd018fc0-8da7-4033-a2ba-6b47de8ebb4f
Homo sapiens
|
42'127 cells x 26'791 genes |
h5ad
647 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
100c6145-7b0e-4ba6-81c1-ffebed0d1ac4
Homo sapiens
|
42'486 cells x 35'483 genes |
h5ad
682 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2727d83a-0af0-443a-bff8-58dc7028289a
Homo sapiens
|
42'528 cells x 31'997 genes |
h5ad
119 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
3a702020-cf66-4ef5-9d11-4a5e835b7efb
Homo sapiens
|
42'568 cells x 26'530 genes |
h5ad
332 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a2d4d33e-4c62-4361-b80a-9be53d2e50e8
Homo sapiens
|
42'650 cells x 60'606 genes |
h5ad
2.03 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7b316f62-7fa0-4b95-bac9-e90866038a85
Homo sapiens
|
42'699 cells x 58'232 genes |
h5ad
510 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6cf139ae-ba92-41b3-acca-3e938d80aff0
Danio rerio
|
42'705 cells x 32'031 genes |
h5ad
40.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0ced5e76-6040-47ff-8a72-93847965afc0
Homo sapiens
|
42'729 cells x 60'606 genes |
h5ad
1.6 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP871
|
42'782 cells x 27 genes |
counts_table
193 KB
|
Not in ASAP | Details |
|
cellxgene
sc
|
07a4e406-3a76-47a3-a21c-a28d7ce7984a
Mus musculus
|
42'826 cells x 45'525 genes |
h5ad
444 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7db0c178-b0a4-442f-ba54-e9e1633a84bb
Homo sapiens
|
42'834 cells x 58'232 genes |
h5ad
573 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9ff99bf8-2524-4ab5-ab6e-4bc218e4a449
Homo sapiens
|
42'901 cells x 59'413 genes |
h5ad
513 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
20634fa3-f3cf-44b5-8bc3-b825610bfe8c
Mus musculus
|
42'905 cells x 19'344 genes |
h5ad
343 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
eec3e37d-ed41-4881-bc6e-aaf39a2c6eb0
Homo sapiens
|
42'921 cells x 35'483 genes |
h5ad
830 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6fedc2f9-5a3b-4209-aa9a-f4d1e6e1185f
Macaca mulatta
|
43'177 cells x 29'060 genes |
h5ad
76 MB
|
Not in ASAP | Details |
|
matkp
sc
|
snRNA_Streets2024_Humans_VAT
Homo sapiens
|
43'188 cells |
zip
400 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP76
|
43'257 cells x 13'711 genes |
rds
254 MB
|
Not in ASAP | Details |