Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
44f66b22-fc58-4a58-a4ac-18f49012960f
Callithrix jacchus
|
58'096 cells x 12'787 genes |
h5ad
954 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
146216e1-ec30-4fee-a1fb-25defe801e2d
Homo sapiens
|
58'265 cells x 35'483 genes |
h5ad
1.09 GB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-HCAD-36
Homo sapiens
|
58'407 cells |
h5ad
1.6 GB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-HCAD-32
Homo sapiens
|
58'615 cells |
h5ad
1.7 GB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-9841
Homo sapiens
|
58'870 cells |
h5ad
1 GB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-11242
Mus musculus
|
59'093 cells |
h5ad
1.1 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP867
|
59'216 cells x 22 genes |
counts_table
539 KB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9434b020-de42-43eb-bcc4-542b2be69015
Homo sapiens
|
59'217 cells x 3'387 genes |
h5ad
907 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP256
Homo sapiens
|
59'286 cells x 16'980 genes |
counts_table
414 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9d584fcb-a28a-4b91-a886-ceb66a88ef81
Homo sapiens
|
59'341 cells x 32'330 genes |
h5ad
272 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
52f18bc3-52d9-487b-bf8f-f0b7aa684b09
Homo sapiens
|
59'505 cells x 58'232 genes |
h5ad
397 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
fa8605cf-f27e-44af-ac2a-476bee4410d3
Homo sapiens
|
59'506 cells x 23'562 genes |
h5ad
372 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
de2c780c-1747-40bd-9ccf-9588ec186cee
Homo sapiens
|
59'572 cells x 32'383 genes |
h5ad
265 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6cda3b13-7257-45b9-ac20-0a7e6697e4f2
Homo sapiens
|
59'605 cells x 32'383 genes |
h5ad
402 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c6413315-7158-46c5-a5fd-7228385694f1
Homo sapiens
|
59'738 cells x 36'020 genes |
h5ad
934 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP885
|
59'769 cells x 27 genes |
counts_table
475 KB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2346
Mus Musculus
|
59'859 cells |
rds
2.16 GB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-9715
Mus musculus
|
59'907 cells |
h5ad
2.7 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
278eac3f-a5a4-4d0a-9d83-0ca7efc67e16
Homo sapiens
|
60'411 cells x 35'461 genes |
h5ad
536 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1b9db9dc-e417-4dd4-8ce4-ff39a86c55a1
Mus musculus
|
60'540 cells x 21'137 genes |
h5ad
568 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
90d4a63b-5c02-43eb-acde-c49345681601
Homo sapiens
|
60'574 cells x 59'029 genes |
h5ad
667 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5500c673-1610-40a0-86d9-64d987ae50e6
Homo sapiens
|
60'668 cells x 26'886 genes |
h5ad
409 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP3352
Mus musculus
|
61'602 cells x 28'116 genes |
rds
73.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0a2d7e87-c3c0-4ed2-86df-ae18811fcc16
Homo sapiens
|
61'747 cells x 60'305 genes |
h5ad
656 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-7895
Mus musculus
|
61'910 cells |
h5ad
1.4 GB
|
Not in ASAP | Details |