Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
2a262b59-7936-4ecd-b656-248247a0559f
Mus musculus
|
62'415 cells x 20'634 genes |
h5ad
865 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
389bfbb9-8ef1-4582-8c41-410131c3d0eb
Homo sapiens
|
62'509 cells x 56'710 genes |
h5ad
489 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b57462e3-1df5-463a-a3fa-4d67b93ef087
Homo sapiens
|
62'711 cells x 35'467 genes |
h5ad
801 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b46237d1-19c6-4af2-9335-9854634bad16
Homo sapiens
|
62'849 cells x 25'776 genes |
h5ad
856 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6c600df6-ddca-4628-a8bb-1d6de1e3f9b4
Homo sapiens
|
63'608 cells x 31'997 genes |
h5ad
227 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-CURD-88
Homo sapiens
|
63'845 cells |
h5ad
1.4 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP860
|
64'054 cells x 27 genes |
counts_table
655 KB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a6858c10-c52a-4a1d-bc12-a90dbd51ca66
Homo sapiens
|
64'091 cells x 24'540 genes |
h5ad
3.57 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4057e00c-0678-454a-90e4-b341a162d007
Homo sapiens
|
64'793 cells x 22'144 genes |
h5ad
576 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
ef0fc6ac-4872-40e1-ab24-e445b19ca6e3
Homo sapiens
|
64'862 cells x 60'330 genes |
h5ad
1.05 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e40c6272-af77-4a10-9385-62a398884f27
Homo sapiens
|
65'088 cells x 33'703 genes |
h5ad
1.42 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
586bc89e-a4a1-4f60-a7b4-3d191f982286
Mus musculus
|
65'272 cells x 24'469 genes |
h5ad
589 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1237
Rattus norvegicus
|
65'481 cells x 16'558 genes |
counts_table
3.75 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4bf585ea-0d0d-483c-a3c9-36f44a5b1adf
Homo sapiens
|
65'575 cells x 32'624 genes |
h5ad
798 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8c42cfd0-0b0a-46d5-910c-fc833d83c45e
Homo sapiens
|
65'662 cells x 24'769 genes |
h5ad
569 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9d8e5dca-03a3-457d-b7fb-844c75735c83
Homo sapiens
|
65'668 cells x 35'476 genes |
h5ad
947 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0d2ee4ac-05ee-40b2-afb6-ebb584caa867
Homo sapiens
|
65'847 cells x 60'606 genes |
h5ad
2.98 GB
|
Not in ASAP | Details |
|
hca
sc
|
64809a52-f703-4aec-b3a5-eca808a971d0::7d6f347c-3b3a-4a8c-a653-03c809e49241
Homo sapiens
|
66'305 cells |
h5ad
119 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e5c63d94-593c-4338-a489-e1048599e751
Homo sapiens
|
66'385 cells x 60'606 genes |
h5ad
3.09 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a20e2f2a-e171-450a-8ddc-8935c2977ad6
Homo sapiens
|
66'613 cells x 49'082 genes |
h5ad
608 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e6361237-ac4e-4c5d-ad8f-f16aca0c0a8f
Homo sapiens
|
66'719 cells x 32'419 genes |
h5ad
1.12 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
19e46756-9100-4e01-8b0e-23b557558a4c
Homo sapiens
|
66'985 cells x 35'335 genes |
h5ad
340 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-6308
Homo sapiens
|
67'016 cells |
h5ad
1.9 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
ec6ceff8-c8bc-488d-b6bf-30df2fa92169
Homo sapiens
|
67'110 cells x 32'383 genes |
h5ad
786 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a56f1a6b-071c-4780-9832-33ca9b8fb391
Homo sapiens
|
67'533 cells x 58'232 genes |
h5ad
750 MB
|
Not in ASAP | Details |