Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
3c75a463-6a87-4132-83a8-c3002624394d
Homo sapiens
|
95'064 cells x 20'966 genes |
h5ad
719 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
bc260987-8ee5-4b6e-8773-72805166b3f7
Homo sapiens
|
95'211 cells x 32'344 genes |
h5ad
463 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
85c60876-7f35-40c5-a256-7808d84c6ba5
Homo sapiens
|
96'129 cells x 32'330 genes |
h5ad
1.17 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1ab4ebbc-18d6-4838-89c2-cdc5b10accfb
Homo sapiens
|
96'479 cells x 35'461 genes |
h5ad
1.11 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
bedee313-cbf4-44a5-a0cd-2ca5bb2068dc
Mus musculus
|
96'529 cells x 15'680 genes |
h5ad
480 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
763d1d88-b38d-4ab0-b00f-72df816b4b08
Homo sapiens
|
96'675 cells x 35'461 genes |
h5ad
821 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP876
|
96'786 cells x 27 genes |
counts_table
808 KB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c7c1fff0-4c9f-4353-afbf-d6a6768d22c3
Homo sapiens
|
96'822 cells x 34'983 genes |
h5ad
453 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP3356
Mus musculus
|
97'113 cells x 167'235 genes |
rds
73.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
60a29d0b-1a37-4447-ac32-00d701580b47
Homo sapiens
|
97'125 cells x 36'030 genes |
h5ad
1.31 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c2a461b1-0c15-4047-9fcb-1f966fe55100
Homo sapiens
|
97'499 cells x 21'858 genes |
h5ad
681 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5ce42b38-d867-487f-9b40-e8bb00b21d0b
Homo sapiens
|
97'788 cells x 26'766 genes |
h5ad
607 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c893ddc3-f25b-45e2-8c9e-155918b4261c
Homo sapiens
|
98'848 cells x 30'818 genes |
h5ad
833 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6d452161-70af-43dd-988c-e3c4050d31e8
Homo sapiens
|
99'029 cells x 26'936 genes |
h5ad
2.31 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
647f6028-4173-4188-9db6-f94e0a65e967
Homo sapiens
|
99'457 cells x 35'475 genes |
h5ad
738 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-6701
Homo sapiens
|
99'647 cells |
h5ad
3.2 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1849
Homo sapiens
|
99'684 cells x 36'601 genes |
h5ad
1.5 GB
|
Not in ASAP | Details |
|
hca
sc
|
c6ef0270-eafc-43bd-8097-c10020a03cfc::bc8f54b0-d66d-4e62-9cdb-d29f3c4cf98b
Homo sapiens
|
99'684 cells |
mtx
1.16 GB
|
Not in ASAP | Details |
|
hca
sc
|
c6ef0270-eafc-43bd-8097-c10020a03cfc::d119092c-df6b-471b-8c79-84107421a8b2
Homo sapiens
|
99'684 cells |
h5ad
1.5 GB
|
Not in ASAP | Details |
|
hca
sc
|
c6ef0270-eafc-43bd-8097-c10020a03cfc::4b2d662d-f90c-44f8-9543-ab584a6ed28b
Homo sapiens
|
99'684 cells |
mtx
1.84 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e6dad530-418b-47f9-af6e-472e56a7b314
Homo sapiens
|
100'055 cells x 56'710 genes |
h5ad
871 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9fddb063-056d-4202-8b8a-4b0ee531d3ce
Homo sapiens
|
100'064 cells x 28'468 genes |
h5ad
805 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
53bc5729-6202-4351-bc99-1f36139e9dc4
Homo sapiens
|
100'215 cells x 35'483 genes |
h5ad
3.09 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9ddea8d9-cc4c-420a-90f6-880996f808d4
Homo sapiens
|
100'307 cells x 27'506 genes |
h5ad
1.15 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP884
|
101'999 cells x 27 genes |
counts_table
865 KB
|
Not in ASAP | Details |