External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

211'441'407
Reset 16849 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
a9affc92-a291-4eb9-996f-147392132323
Mus musculus
159'738 cells x 30'177 genes h5ad
2.7 GB
Not in ASAP Details
cellxgene
sc
ed78c6b7-cb40-4ebc-b55f-40bc99ba1b5d
Homo sapiens
160'632 cells x 32'357 genes h5ad
1.12 GB
Not in ASAP Details
cellxgene
sc
98f5d518-1e60-4307-b732-ab045cd3cbc2
Homo sapiens
160'658 cells x 33'606 genes h5ad
3.56 GB
Not in ASAP Details
cellxgene
sc
ed5d841d-6346-47d4-ab2f-7119ad7e3a35
Homo sapiens
161'764 cells x 20'264 genes h5ad
2.43 GB
Not in ASAP Details
cellxgene
sc
0c8e4dd1-c592-4e60-8800-a658494537e5
Rattus norvegicus
163'003 cells x 15'710 genes h5ad
1.23 GB
Not in ASAP Details
cellxgene
sc
64267fb5-7b70-4705-a13b-cc38966c22a8
Homo sapiens
163'714 cells x 35'474 genes h5ad
2.16 GB
Not in ASAP Details
cellxgene
sc
346c5aad-b034-4248-8cbe-0a05fd634b9c
Homo sapiens
163'779 cells x 59'273 genes h5ad
15.6 GB
Not in ASAP Details
cellxgene
sc
38e5738d-3870-433b-858a-5c364f322439
Homo sapiens
163'779 cells x 59'273 genes h5ad
19.7 GB
Not in ASAP Details
cellxgene
sc
b64b932b-1b94-4cee-b8b2-83cc3f0a3b25
Homo sapiens
164'114 cells x 39'404 genes h5ad
2.19 GB
Not in ASAP Details
broad_scp
sc
SCP3740
Homo sapiens
165'172 cells x 24'606 genes rds
6.29 GB
Not in ASAP Details
cellxgene
sc
862a4311-5ab1-48cf-b517-db2c1bb9d531
Homo sapiens
165'209 cells x 20'794 genes h5ad
1.82 GB
Not in ASAP Details
cellxgene
sc
98219f72-0f9a-4de9-a859-c81834f24ab1
Homo sapiens
166'085 cells x 26'996 genes h5ad
453 MB
Not in ASAP Details
cellxgene
sc
ca46ffe6-0a26-4d8d-82fa-81722daf1102
Homo sapiens
166'149 cells x 28'101 genes h5ad
1.23 GB
Not in ASAP Details
cellxgene
sc
0caedec7-1c7d-4e79-aba2-50f6916e643f
Homo sapiens
166'895 cells x 31'093 genes h5ad
1.34 GB
Not in ASAP Details
cellxgene
sc
bd65a70f-b274-4133-b9dd-0d1431b6af34
Homo sapiens
167'283 cells x 15'934 genes h5ad
1.1 GB
Not in ASAP Details
cellxgene
sc
e84f2780-51e8-4cfa-8aa0-13bbfef677c7
Homo sapiens
167'598 cells x 30'172 genes h5ad
979 MB
Not in ASAP Details
cellxgene
sc
8a961a54-7e37-41e4-8e7b-463b23146b17
Homo sapiens
167'910 cells x 36'166 genes h5ad
2.49 GB
Not in ASAP Details
cellxgene
sc
81c2d711-7fd5-48f0-bc74-57229f3c9554
Homo sapiens
168'295 cells x 38'361 genes h5ad
2.23 GB
Not in ASAP Details
cellxgene
sc
ac0fee7e-0999-4319-b244-20278e1ff2fb
Homo sapiens
168'860 cells x 35'483 genes h5ad
4.45 GB
Not in ASAP Details
cellxgene
sc
1252c5fb-945f-42d6-b1a8-8a3bd864384b
Homo sapiens
170'281 cells x 6'361 genes h5ad
5.45 GB
Not in ASAP Details
cellxgene
sc
3c361813-5d5e-4868-bfe5-e7591e7b5381
Homo sapiens
172'120 cells x 37'490 genes h5ad
2.18 GB
Not in ASAP Details
cellxgene
sc
aa633105-e8e5-4dcc-b72d-6da6c191b3e9
Homo sapiens
172'175 cells x 32'383 genes h5ad
2 GB
Not in ASAP Details
cellxgene
sc
07854d9c-5375-4a9b-ac34-fa919d3c3686
Homo sapiens
172'847 cells x 28'813 genes h5ad
1.46 GB
Not in ASAP Details
cellxgene
sc
938a9fe1-851b-4458-b87e-3b1b83e4b610
Danio rerio
173'244 cells x 32'031 genes h5ad
166 MB
Not in ASAP Details
cellxgene
sc
f0939ae1-0877-42b2-bc0e-3249a42c2c0f
Homo sapiens
175'387 cells x 59'273 genes h5ad
16.7 GB
Not in ASAP Details
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