External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Meningeal lymphatics-microglia axis regulates synaptic physiology [ligation] GSE270428 Mus musculus	2 samples	archive_table 235 MB	Not in ASAP	Details
geo bulk	DCAF7 regulates hematopoietic stem cell function and differentiation through ... GSE279267 Mus musculus	2 samples	archive_table 235 MB	Not in ASAP	Details
geo bulk	total RNA-seq from WTC11 (ENCSR914ALB) GSE219903 Homo sapiens	2 samples	archive_table 236 MB	Not in ASAP	Details
geo bulk	Melatonin Synergizes with Prostaglandin E2 to Enhance YAP-mediated Regenerati... GSE293340 Mus musculus	2 samples	archive_table 238 MB	Not in ASAP	Details
geo bulk	Stably-Inverted Apical-Out Human Upper Airway Organoids for SARS-CoV-2 Infect... GSE249570 Homo sapiens	2 samples	archive_table 242 MB	Not in ASAP	Details
geo bulk	Head-to-head preclinical treatment design prioritizes promising therapies for... GSE303054 Mus musculus	2 samples	archive_table 242 MB	Not in ASAP	Details
geo bulk	Long read sequencing of nuclear RNAs from human coronary artery smooth muscle... GSE165445 Homo sapiens	2 samples	archive_table 243 MB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR325BJP) GSE219692 Homo sapiens	2 samples	archive_table 245 MB	Not in ASAP	Details
geo bulk	Gene Regulation Dynamics during the Cell Cycle uncovered by RNA velocity and ... GSE167609 Mus musculus; Homo sapiens	2 samples	archive_table 251 MB	Not in ASAP	Details
geo bulk	A novel t(5;7)(q31;q21/CDK6::IL3 in immature T-cell acute lymphoblastic leuke... GSE211170 Homo sapiens	2 samples	archive_table 252 MB	Not in ASAP	Details
geo bulk	Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering GSE296287 Mus musculus	2 samples	archive_table 258 MB	Not in ASAP	Details
geo bulk	Induction of a torpor-like hypothermic and hypometabolic state in rodents by ... GSE228180 Mus musculus	2 samples	archive_table 258 MB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR591KOB) GSE219470 Homo sapiens	2 samples	archive_table 263 MB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR264IXQ) GSE219652 Homo sapiens	2 samples	archive_table 264 MB	Not in ASAP	Details
geo bulk	Biomechanical Stress–Mediated Mesenchymal Fibulin-1–WNT Signaling Regulates I... GSE210144 Sus scrofa	2 samples	archive_table 271 MB	Not in ASAP	Details
geo bulk	total RNA-seq from WTC11 (ENCSR723OPL) GSE220009 Homo sapiens	2 samples	archive_table 275 MB	Not in ASAP	Details
geo bulk	Myelin insulation as a risk factor for axonal degeneration in autoimmune demy... GSE222063 Mus musculus	2 samples	archive_table 276 MB	Not in ASAP	Details
geo bulk	The Drosophila OSC Genome: A Resource for Studies of Transposon and piRNA Bio... GSE310176 Drosophila melanogaster	2 samples	archive_table 276 MB	Not in ASAP	Details
geo bulk	Integrated Genome and Transcriptome Analyses Reveal the Mechanism of Genome I... GSE143566 Homo sapiens	2 samples	archive_table 276 MB	Not in ASAP	Details
geo bulk	IDH status dictates oHSV mediated metabolic reprogramming affecting anti-tumo... GSE289317 Mus musculus	2 samples	archive_table 277 MB	Not in ASAP	Details
geo bulk	Human pluripotent stem cell-derived cells endogenously expressing follicle-st... GSE184352 Homo sapiens	2 samples	counts_table 280 MB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR062FHL) GSE219414 Homo sapiens	2 samples	archive_table 281 MB	Not in ASAP	Details
geo bulk	ROS Activated NETosis of Bone Marrow CD55+ Intermediate Mature Neutrophils Th... GSE273832 Mus musculus	2 samples	archive_table 286 MB	Not in ASAP	Details
geo bulk	Endothelial Pim3 kinase protects the vascular barrier during lung metastasis GSE235394 Mus musculus	2 samples	archive_table 293 MB	Not in ASAP	Details
geo bulk	Systematic identification and characterization of Exon-intron circRNAs GSE253233 Homo sapiens	2 samples	archive_table 293 MB	Not in ASAP	Details