Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
hca
sc
|
cc95ff89-2e68-4a08-a234-480eca21ce79::fec93496-9b79-4d1c-b193-97ea71543b6f
Homo sapiens
|
266'271 cells |
h5ad
1.8 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5af90777-6760-4003-9dba-8f945fec6fdf
Homo sapiens
|
270'855 cells x 19'322 genes |
h5ad
1.51 GB
|
Not in ASAP | Details |
|
hca
sc
|
8f1f653d-3ea1-4d8e-b4a7-b97dc852c2b1::112b7fa1-fb61-4b3f-a4b5-9dd5ee388ad7
Homo sapiens
|
270'855 cells |
h5ad
2.62 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d68a8b48-abf0-4bd5-8834-155d34ec448a
Homo sapiens
|
271'381 cells x 35'477 genes |
h5ad
1.77 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
3f766409-fcd6-4553-99e8-259bc24a6be6
Homo sapiens
|
272'162 cells x 35'475 genes |
h5ad
2.47 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f628a4aa-d935-46cb-872d-454a7d133acf
Homo sapiens
|
273'711 cells x 35'477 genes |
h5ad
2.72 GB
|
Details | |
|
cellxgene
sc
|
5a9cfb44-494a-4540-8db8-7143b1bb5a6f
Homo sapiens
|
274'555 cells x 37'389 genes |
h5ad
1.67 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP3840
Homo sapiens
|
274'812 cells x 5'000 genes |
h5ad
5.39 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
257adc73-8152-414b-a2c7-73861b8e0c0a
Mus musculus
|
276'556 cells x 254 genes |
h5ad
142 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP875
|
277'224 cells x 27 genes |
counts_table
2.38 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
cc47b200-9c67-452f-990c-f84d3b33b990
Homo sapiens
|
278'040 cells x 35'477 genes |
h5ad
2.56 GB
|
Details | |
|
cellxgene
sc
|
58be58d9-e319-46ed-a7c9-299a8c5082a8
Macaca mulatta
|
278'260 cells x 29'060 genes |
h5ad
462 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b0ef440b-e303-4ad2-ada8-ce13336280ba
Homo sapiens
|
280'518 cells x 32'118 genes |
h5ad
2.3 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2613
Homo sapiens
|
280'518 cells x 33'694 genes |
h5ad
7.17 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
215ede73-4f67-4a72-b77e-9c3b077b6dfc
Homo sapiens
|
282'930 cells x 60'305 genes |
h5ad
4.62 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP895
|
283'894 cells x 27 genes |
counts_table
5.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e59a4394-80db-42e4-85e6-8f0e59b81f42
Homo sapiens
|
285'699 cells x 58'226 genes |
h5ad
1.86 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP498
|
287'269 cells x 33'694 genes |
h5ad
416 MB
|
Not in ASAP | Details |
|
hca
sc
|
2184e63d-82d8-4ab2-839e-e93f8395f568::df861baa-1d84-47e4-a037-1f29f3cee994
Homo sapiens
|
287'269 cells |
h5ad
1.76 GB
|
Not in ASAP | Details |
|
hca
sc
|
2184e63d-82d8-4ab2-839e-e93f8395f568::3f2ed25a-57c2-4d33-8864-f4e2f901fc02
Homo sapiens
|
287'269 cells |
h5ad
3.48 GB
|
Not in ASAP | Details |
|
hca
sc
|
2184e63d-82d8-4ab2-839e-e93f8395f568::bb9570aa-1366-40da-a101-e45cf0318aa6
Homo sapiens
|
287'269 cells |
mtx
4.21 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
977e6167-e91a-435c-a5a4-ceefc88fdb32
Mus musculus
|
289'569 cells x 45'525 genes |
h5ad
3.25 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
3a7f3ab4-a280-4b3b-b2c0-6dd05614a78c
Homo sapiens
|
291'833 cells x 58'232 genes |
h5ad
3.47 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
fe2479fd-daff-41a8-97dc-a50457ab1871
Homo sapiens
|
292'010 cells x 54'780 genes |
h5ad
1.11 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7bb64315-9e5a-41b9-9235-59acf9642a3e
Homo sapiens
|
293'823 cells x 25'853 genes |
h5ad
2.42 GB
|
Not in ASAP | Details |