Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
f72958f5-7f42-4ebb-98da-445b0c6de516
Homo sapiens
|
584'884 cells x 27'402 genes |
h5ad
5.2 GB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-ANND-1
Homo sapiens
|
584'884 cells |
h5ad
13 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
066943a2-fdac-4b29-b348-40cede398e4e
Homo sapiens
|
584'944 cells x 27'402 genes |
h5ad
5.47 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
48101fa2-1a63-4514-b892-53ea1d3a8657
Homo sapiens
|
589'390 cells x 31'867 genes |
h5ad
6.72 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c5d88abe-f23a-45fa-a534-788985e93dad
Homo sapiens
|
592'317 cells x 60'606 genes |
h5ad
18.4 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1303
Homo sapiens
|
592'689 cells x 36'601 genes |
h5ad
12.6 GB
|
Not in ASAP | Details |
|
hca
sc
|
85c0d6fa-f117-4d76-b01a-5d5e8f5f9188::631f7021-2e0b-4f36-8a42-ef3e66cb4882
Homo sapiens
|
592'689 cells |
mtx
10.9 GB
|
Not in ASAP | Details |
|
hca
sc
|
85c0d6fa-f117-4d76-b01a-5d5e8f5f9188::52a400d9-4b5e-4bc0-9612-27d801ca8d3c
Homo sapiens
|
592'689 cells |
mtx
16.9 GB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-HCAD-4
Homo sapiens
|
596'816 cells |
h5ad
9.3 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2719
Mus musculus musculus
|
597'668 cells x 26'431 genes |
h5ad
26.4 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2adb1f8a-a6b1-4909-8ee8-484814e2d4bf
Homo sapiens
|
599'926 cells x 26'069 genes |
h5ad
1.31 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
01ad3cd7-3929-4654-84c0-6db05bd5fd59
Homo sapiens
|
600'929 cells x 18'006 genes |
h5ad
5.88 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
ae0cd1cb-636b-4d1c-b135-460dadcba980
Mus musculus
|
608'096 cells x 29'286 genes |
h5ad
1.23 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
960ecd06-e7c2-463d-9a5b-6832994376c6
Homo sapiens
|
610'429 cells x 35'475 genes |
h5ad
5.09 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e0ed3c55-aff6-4bb7-b6ff-98a2d90b890c
Mus musculus
|
611'034 cells x 23'693 genes |
h5ad
2.15 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
de5416ef-bbfa-41f3-99d4-01a3554173f5
Homo sapiens
|
621'200 cells x 37'389 genes |
h5ad
4.81 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c92321dd-0503-47a8-8260-9970aed6c0b7
Mus musculus
|
628'251 cells x 45'525 genes |
h5ad
7.08 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c3aa4f95-7a18-4a7d-8dd8-ca324d714363
Homo sapiens
|
638'941 cells x 30'173 genes |
h5ad
15.9 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c7775e88-49bf-4ba2-a03b-93f00447c958
Homo sapiens
|
647'366 cells x 24'245 genes |
h5ad
6.57 GB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-8142
Homo sapiens
|
649'933 cells |
h5ad
13 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
350237e0-9f48-4cbd-9140-3b44495549f3
Homo sapiens
|
670'749 cells x 24'453 genes |
h5ad
7.2 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
74014ef8-d2d0-4cbc-8ba2-037f30753ffd
Homo sapiens
|
676'845 cells x 37'560 genes |
h5ad
8.73 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e6722845-9377-4b34-80a2-7921921e1396
Homo sapiens
|
677'256 cells x 32'014 genes |
h5ad
819 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP846
|
677'785 cells x 3 genes |
counts_table
4.39 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2c820d53-cbd7-4e0a-be7a-a0ad1989a98f
Homo sapiens
|
685'024 cells x 35'777 genes |
h5ad
3.08 GB
|
Not in ASAP | Details |