External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Hepatic T-cell senescence is implicated in the progression of fatty liver dis... GSE239612 Mus musculus	2 samples	archive_table 300 MB	Not in ASAP	Details
geo bulk	Effect of external cues on clock-driven protection from Influenza A infection GSE296722 Mus musculus	2 samples	archive_table 300 MB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR601DZY) GSE219494 Homo sapiens	2 samples	archive_table 302 MB	Not in ASAP	Details
geo bulk	total RNA-seq from WTC11 (ENCSR738IHB) GSE219681 Homo sapiens	2 samples	archive_table 302 MB	Not in ASAP	Details
geo bulk	Identification of transcription termination defects at DNA hypomethylated tra... GSE178688 Danio rerio	2 samples	archive_table 303 MB	Not in ASAP	Details
geo bulk	Postnatal Subventricular Zone Injury Predicts Motor Impairment in Preterm Inf... GSE243778 Mus musculus	2 samples	archive_table 307 MB	Not in ASAP	Details
geo bulk	Endothelial Pim3 kinase protects the vascular barrier during lung metastasis ... GSE253751 Mus musculus	2 samples	archive_table 312 MB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR287DHQ) GSE219995 Homo sapiens	2 samples	archive_table 313 MB	Not in ASAP	Details
geo bulk	KATNAL2 mutation cause hydrocephalus by impairing vesicular trafficking and e... GSE278728 Mus musculus	2 samples	archive_table 314 MB	Not in ASAP	Details
geo bulk	Rabies-Infected Neurons Can Be Transcriptomically Characterized Despite Chang... GSE196771 Mus musculus	2 samples	archive_table 314 MB	Not in ASAP	Details
geo bulk	Investigating the role of Bax/Bak as a driver of inflammation in aging GSE235225 Mus	2 samples	archive_table 314 MB	Not in ASAP	Details
geo bulk	Non-adhesive alginate promotes further differentiation and models fibrosis of... GSE171331 Homo sapiens	2 samples	archive_table 315 MB	Not in ASAP	Details
geo bulk	An integrated landscape of mRNA and protein isoforms [NGS] GSE261379 Homo sapiens	2 samples	archive_table 316 MB	Not in ASAP	Details
geo bulk	RNA-sequencing results of MDA-MB-231 with/without OGFOD1 GSE160363 Homo sapiens	2 samples	archive_table 317 MB	Not in ASAP	Details
geo bulk	Oxford nanopore transcriptome of cassava, Manihot esculenta variety TM12 GSE225361 Manihot esculenta	2 samples	archive_table 318 MB	Not in ASAP	Details
geo bulk	A super enhancer-controlled BRD4/ERα-RET-ERα positive feedback loop promotes ... GSE186644 Homo sapiens	2 samples	archive_table 320 MB	Not in ASAP	Details
geo bulk	The MR1/MAIT cell axis reduces dystrophic neurite development in Alzheimer’s ... GSE273139 Mus musculus	2 samples	archive_table 321 MB	Not in ASAP	Details
geo bulk	CRISPR RNA-seq from HepG2 (ENCSR147RTA) GSE176779 Homo sapiens	2 samples	archive_table 323 MB	Not in ASAP	Details
geo bulk	Spliceostatin A limits U1 snRNP availability and leads to premature poly(A)-t... GSE150843 Homo sapiens	2 samples	archive_table 324 MB	Not in ASAP	Details
geo bulk	Targeting STING–induced immune evasion with nanoparticulate binary pharmacolo... GSE306421 Mus musculus	2 samples	archive_table 327 MB	Not in ASAP	Details
geo bulk	Cisplatin-induced decrease of mRNA length reveals functional and translated i... GSE180918 Homo sapiens	2 samples	archive_table 328 MB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR949BBZ) GSE219935 Homo sapiens	2 samples	archive_table 332 MB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR866UOA) GSE219846 Homo sapiens	2 samples	archive_table 345 MB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR738ZHN) GSE219683 Homo sapiens	2 samples	archive_table 354 MB	Not in ASAP	Details
geo bulk	Non-Mutated Human Tau Stimulates Alzheimer’s Disease-Relevant Neurodegenerati... GSE285945 Mus musculus	2 samples	archive_table 357 MB	Not in ASAP	Details