External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

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Source Dataset Matrix Format ASAP Actions
hca
sc
Myofibroblast transcriptome indicates SFRP2hi fibroblast progenitors in syste... Publication DOI
7f351a4c-d24c-4fcd-9040-f79071b097d0::42a2e9c1-6db4-4490-9531-672a16f8d1e7
Homo sapiens
737'280 cells h5
36.4 MB
 Not in ASAP Details
hca
sc
A molecular cell atlas of the human lung from single-cell RNA sequencing Publication DOI
6936da41-3692-46bb-bca1-cd0f507991e9::0d41632f-d673-46a0-b3e4-652c94256b06
Homo sapiens
737'280 cells h5
37.1 MB
 Not in ASAP Details
hca
sc
A molecular cell atlas of the human lung from single-cell RNA sequencing Publication DOI
6936da41-3692-46bb-bca1-cd0f507991e9::8847eeb0-270b-4210-8230-bf0aff4c0f56
Homo sapiens
737'280 cells h5
37.4 MB
 Not in ASAP Details
hca
sc
A molecular cell atlas of the human lung from single-cell RNA sequencing Publication DOI
6936da41-3692-46bb-bca1-cd0f507991e9::a6fec5c0-ad1c-46a8-b53f-dd91834e38a8
Homo sapiens
737'280 cells h5
38.3 MB
 Not in ASAP Details
hca
sc
Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia. Publication DOI
b91c623b-1945-4727-b167-0a93027b0d3f::9cac7ad3-9d00-43e5-aa89-d1193927ed8e
Homo sapiens
737'280 cells h5
38.4 MB
 Not in ASAP Details
hca
sc
Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia. Publication DOI
b91c623b-1945-4727-b167-0a93027b0d3f::64656c54-b1e4-471f-b872-75edddc31fdf
Homo sapiens
737'280 cells h5
38.6 MB
 Not in ASAP Details
hca
sc
Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia. Publication DOI
b91c623b-1945-4727-b167-0a93027b0d3f::adb6a524-38c9-4e7c-8d57-d643dc03c07a
Homo sapiens
737'280 cells h5
40.3 MB
 Not in ASAP Details
hca
sc
Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia. Publication DOI
b91c623b-1945-4727-b167-0a93027b0d3f::751fae2f-0e04-4647-87af-6275c3eb3683
Homo sapiens
737'280 cells h5
40.6 MB
 Not in ASAP Details
hca
sc
Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia. Publication DOI
b91c623b-1945-4727-b167-0a93027b0d3f::b84acffa-3f4e-4e57-bff8-5c180047be41
Homo sapiens
737'280 cells h5
40.7 MB
 Not in ASAP Details
hca
sc
A molecular cell atlas of the human lung from single-cell RNA sequencing Publication DOI
6936da41-3692-46bb-bca1-cd0f507991e9::eafffa01-1e9d-495d-af37-629b918b9cd3
Homo sapiens
737'280 cells h5
40.9 MB
 Not in ASAP Details
hca
sc
Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia. Publication DOI
b91c623b-1945-4727-b167-0a93027b0d3f::f4ebf197-4ff2-4686-b330-b2f246f95e20
Homo sapiens
737'280 cells h5
41.8 MB
 Not in ASAP Details
hca
sc
A molecular cell atlas of the human lung from single-cell RNA sequencing Publication DOI
6936da41-3692-46bb-bca1-cd0f507991e9::d9d6ca3d-cbee-4bc4-bd45-62abd0218863
Homo sapiens
737'280 cells h5
41.9 MB
 Not in ASAP Details
hca
sc
Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia. Publication DOI
b91c623b-1945-4727-b167-0a93027b0d3f::98cbd7ca-3ba2-4853-9d33-6a1e4032d89c
Homo sapiens
737'280 cells h5
42 MB
 Not in ASAP Details
hca
sc
Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia. Publication DOI
b91c623b-1945-4727-b167-0a93027b0d3f::d12c285b-62cc-47c0-be0a-c8dff57334e6
Homo sapiens
737'280 cells h5
45 MB
 Not in ASAP Details
hca
sc
A molecular cell atlas of the human lung from single-cell RNA sequencing Publication DOI
6936da41-3692-46bb-bca1-cd0f507991e9::e524ab06-07df-4707-87a3-ea76bc6053e8
Homo sapiens
737'280 cells h5
45.5 MB
 Not in ASAP Details
hca
sc
Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia. Publication DOI
b91c623b-1945-4727-b167-0a93027b0d3f::c42657b5-a6fc-407c-8c88-bae716dd2829
Homo sapiens
737'280 cells h5
47.3 MB
 Not in ASAP Details
hca
sc
Dandelion uses the single-cell adaptive immune receptor repertoire to explore... Publication DOI
a83b7f45-bfb1-4c6a-97e9-8e3370065cc1::a2328438-e727-4fbb-9e2d-9f4caf9f0d98
Homo sapiens
737'280 cells h5
48 MB
 Not in ASAP Details
hca
sc
Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia. Publication DOI
b91c623b-1945-4727-b167-0a93027b0d3f::56ed917f-e5ed-421f-a2e5-25889a6f57f4
Homo sapiens
737'280 cells h5
51.9 MB
 Not in ASAP Details
hca
sc
Dandelion uses the single-cell adaptive immune receptor repertoire to explore... Publication DOI
a83b7f45-bfb1-4c6a-97e9-8e3370065cc1::ec3bff54-4208-4b44-a890-776b932a93a1
Homo sapiens
737'280 cells h5
52.6 MB
 Not in ASAP Details
hca
sc
Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia. Publication DOI
b91c623b-1945-4727-b167-0a93027b0d3f::b061ee6b-4ade-4d6e-911a-fb83c6497d6e
Homo sapiens
737'280 cells h5
58.7 MB
 Not in ASAP Details
hca
sc
Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia. Publication DOI
b91c623b-1945-4727-b167-0a93027b0d3f::66ca1a50-72a2-4ebe-9341-044af9ffed02
Homo sapiens
737'280 cells h5
59.7 MB
 Not in ASAP Details
hca
sc
A molecular cell atlas of the human lung from single-cell RNA sequencing Publication DOI
6936da41-3692-46bb-bca1-cd0f507991e9::134ce203-e3e0-48b3-a527-b8bc617ff020
Homo sapiens
737'280 cells mtx
70.2 MB
 Not in ASAP Details
hca
sc
A molecular cell atlas of the human lung from single-cell RNA sequencing Publication DOI
6936da41-3692-46bb-bca1-cd0f507991e9::1c544e0a-9fea-4dcb-a716-baf562e0e4ca
Homo sapiens
737'280 cells mtx
79.9 MB
 Not in ASAP Details
hca
sc
A molecular cell atlas of the human lung from single-cell RNA sequencing Publication DOI
6936da41-3692-46bb-bca1-cd0f507991e9::f12b38ce-a037-483a-847e-06dd6c5cffda
Homo sapiens
737'280 cells mtx
84 MB
 Not in ASAP Details
hca
sc
A molecular cell atlas of the human lung from single-cell RNA sequencing Publication DOI
6936da41-3692-46bb-bca1-cd0f507991e9::6fd3b218-5264-411b-aef9-5887ac6d1ce9
Homo sapiens
737'280 cells mtx
87.1 MB
 Not in ASAP Details
of 674