Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
6725ee8e-ef5b-4e68-8901-61bd14a1fe73
Homo sapiens
|
806'646 cells x 25'367 genes |
h5ad
11.7 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8ef06ea4-8d0f-4303-a652-7d4604402b1f
Homo sapiens
|
815'769 cells x 35'477 genes |
h5ad
9.59 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
ebc2e1ff-c8f9-466a-acf4-9d291afaf8b3
Homo sapiens
|
836'148 cells x 36'306 genes |
h5ad
5.21 GB
|
Not in ASAP | Details |
|
hca
sc
|
cdabcf0b-7602-4abf-9afb-3b410e545703::ebfb2528-f188-449a-b29b-300ee843adab
Homo sapiens
|
836'148 cells |
h5ad
5.23 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1a9f3b38-b86d-416d-bbdc-9058ad3ff42d
Homo sapiens
|
851'993 cells x 35'477 genes |
h5ad
6.65 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4934091f-85d6-4a82-8915-6812aea23cb9
Homo sapiens
|
854'753 cells x 18'063 genes |
h5ad
9.82 GB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-156455
Drosophila melanogaster
|
857'347 cells |
h5ad
10 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP101
|
875'225 cells x 33'740 genes |
h5ad
1.15 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
65badd7a-9262-4fd1-9ce2-eb5dc0ca8039
Homo sapiens
|
881'081 cells x 32'383 genes |
h5ad
6.42 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2706
Callithrix jacchus
|
881'832 cells x 22'582 genes |
h5ad
58.7 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b165f033-9dec-468a-9248-802fc6902a74
Homo sapiens
|
888'263 cells x 58'232 genes |
h5ad
4.35 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
232f6a5a-a04c-4758-a6e8-88ab2e3a6e69
Homo sapiens
|
892'296 cells x 17'764 genes |
h5ad
12 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2879
Homo sapiens
|
904'695 cells x 85'673 genes |
h5ad
905 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
fd072bc3-2dfb-46f8-b4e3-467cb3223182
Homo sapiens
|
908'046 cells x 32'383 genes |
h5ad
9.01 GB
|
Not in ASAP | Details |
|
hca
sc
|
fcaa53cd-ba57-4bfe-af9c-eaa958f95c1a::8b27a6bd-1bf7-4286-a0ef-01e7006dc5bf
Homo sapiens
|
911'873 cells |
h5ad
5.29 GB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-ANND-5
Homo sapiens
|
911'873 cells |
h5ad
16 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1891
Mus musculus
|
915'828 cells x 32'457 genes |
h5ad
161 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b252b015-b488-4d5c-b16e-968c13e48a2c
Homo sapiens
|
927'205 cells x 31'093 genes |
h5ad
10.6 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
364bd0c7-f7fd-48ed-99c1-ae26872b1042
Homo sapiens
|
931'012 cells x 30'471 genes |
h5ad
6.01 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
3c364ffe-d599-44d5-a77f-6c5fd7038cf6
Homo sapiens
|
959'629 cells x 35'477 genes |
h5ad
8.68 GB
|
Details | |
|
cellxgene
sc
|
6d06c94d-25ff-4d7b-9a09-659289dd4621
Homo sapiens
|
977'608 cells x 32'354 genes |
h5ad
7.98 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
fa27492b-82ff-4ab7-ac61-0e2b184eee67
Homo sapiens
|
1'001'288 cells x 45'676 genes |
h5ad
4.6 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
24921392-22ed-479a-9144-7d40adf148ae
Homo sapiens
|
1'004'112 cells x 47'789 genes |
h5ad
5.79 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP3177
Homo sapiens
|
1'004'112 cells x 49'401 genes |
h5ad
12.2 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
22b83bd5-1886-4a90-82da-fa80123a90de
Mus musculus
|
1'033'409 cells x 45'525 genes |
h5ad
8.87 GB
|
Not in ASAP | Details |