Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
ec6ef004-5f30-4a40-b282-980cca20a561
Homo sapiens
|
7'513 cells x 60'606 genes |
h5ad
368 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-8751
Mus musculus
|
7'542 cells |
h5ad
273 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-10197
Mus musculus
|
7'553 cells |
h5ad
202 MB
|
Not in ASAP | Details |
|
hca
sc
|
b176d756-62d8-4933-83a4-8b026380262f::f9426eb3-8931-42fa-9fee-c65695bb2142
Homo sapiens
|
7'569 cells |
h5ad
36.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a9bedd04-51cb-42ad-83fe-cd749de71f1b
Homo sapiens
|
7'571 cells x 35'477 genes |
h5ad
58.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
86301039-e43d-4f56-a962-11b8be1edc8c
Danio rerio
|
7'578 cells x 32'031 genes |
h5ad
10.5 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1017
|
7'585 cells |
counts_table
555 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5fb841eb-3ffe-4a89-9bec-d4d0be8c8cd0
Danio rerio
|
7'589 cells x 32'031 genes |
h5ad
10.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
137ca42b-33b3-48fa-ae80-02a0747027cb
Homo sapiens
|
7'594 cells x 32'383 genes |
h5ad
142 MB
|
Not in ASAP | Details |
|
matkp
sc
|
SingleCell_Li2022_Mouse_SCP708_WC_ING
Mus musculus
|
7'608 cells |
zip
22.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
24584be9-d3d5-49c3-a042-99c18fe324db
Homo sapiens
|
7'618 cells x 21'459 genes |
h5ad
123 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
55b219e4-039f-4b54-bb9f-dc054dd1e274
Mus musculus
|
7'622 cells x 27'368 genes |
h5ad
27.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e2529f66-d051-4670-b34a-7dca4e474f9f
Mus musculus
|
7'632 cells x 24'551 genes |
h5ad
43.4 MB
|
Not in ASAP | Details |
|
hca
sc
|
9d97f01f-9313-416e-9b07-560f048b2350::fc3e04f1-2fb9-4c0b-86fc-bdada3999339
Homo sapiens
|
7'660 cells |
h5
25.2 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-CURD-13
Gallus gallus
|
7'688 cells |
h5ad
150 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
cfa755c1-48c5-4336-94f4-aa95eca4fbd5
Homo sapiens
|
7'689 cells x 58'232 genes |
h5ad
82.7 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-126139
Drosophila melanogaster
|
7'724 cells |
h5ad
152 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
aa5ccb22-251f-41e2-87b6-96d2baef7131
Danio rerio
|
7'726 cells x 32'031 genes |
h5ad
10.4 MB
|
Not in ASAP | Details |
|
hca
sc
|
08fb10df-32e5-456c-9882-e33fcd49077a::d399d931-f023-4eed-a4d3-c71cb40add08
Homo sapiens
|
7'732 cells |
h5
13.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
cee9b331-3ba0-4461-8bbd-867819d9fc0a
Homo sapiens
|
7'750 cells x 14'059 genes |
h5ad
616 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
527641f0-df64-4c80-957c-a65dccd477bc
Homo sapiens
|
7'750 cells x 14'109 genes |
h5ad
618 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8ff0cef9-393e-43de-9722-a1e12c239727
Homo sapiens
|
7'750 cells x 17'816 genes |
h5ad
708 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f6cc8a47-2dea-40aa-8608-d771c5ef8a07
Homo sapiens
|
7'750 cells x 18'769 genes |
h5ad
743 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
17e9d436-a264-4c94-a42d-48c8daf6fdd9
Homo sapiens
|
7'750 cells x 20'939 genes |
h5ad
846 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a82c43bb-a703-446d-aa24-049bf013121f
Homo sapiens
|
7'750 cells x 21'397 genes |
h5ad
866 MB
|
Not in ASAP | Details |