Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
4319097a-acae-4124-beed-d1173ffe1464
Homo sapiens
|
7'750 cells x 23'300 genes |
h5ad
940 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9c1b5626-58df-4401-ae7b-f66d068c1551
Homo sapiens
|
7'750 cells x 24'045 genes |
h5ad
984 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c54c9659-1b6b-4d4a-96f0-7dc987410f2d
Homo sapiens
|
7'750 cells x 24'314 genes |
h5ad
996 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
59632ec0-6f10-48c6-af79-81024e84843e
Homo sapiens
|
7'750 cells x 24'440 genes |
h5ad
991 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c0fb0d06-225b-4611-b802-d2f34b438a29
Homo sapiens
|
7'750 cells x 25'063 genes |
h5ad
1020 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
3f6ab2aa-6c63-4753-b652-3a9b9e7c8ee5
Homo sapiens
|
7'750 cells x 27'945 genes |
h5ad
1.08 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
3bfd5174-5b49-4e58-b233-ed0f4edd0bec
Homo sapiens
|
7'750 cells x 28'125 genes |
h5ad
1.08 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0ae6f031-2f9c-4247-8b26-db320d6efd32
Homo sapiens
|
7'750 cells x 28'832 genes |
h5ad
1.11 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
432f3af5-6a79-401f-b315-fb2df789f32c
Homo sapiens
|
7'750 cells x 29'249 genes |
h5ad
1.13 GB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-12687
Mus musculus
|
7'754 cells |
h5ad
203 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2046
Mus musculus
|
7'758 cells x 16'225 genes |
rds
835 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
3e55180c-780a-4424-9434-5296640ffc0d
Homo sapiens
|
7'774 cells x 32'397 genes |
h5ad
71.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8640d9f0-ca44-4158-b13b-0e84a82b5b29
Danio rerio
|
7'777 cells x 32'031 genes |
h5ad
10.5 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-121619
Arabidopsis thaliana
|
7'777 cells |
h5ad
213 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
20d87640-4be8-487f-93d4-dce38378d00f
Homo sapiens
|
7'803 cells x 32'088 genes |
h5ad
42 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b6203114-e133-458a-aed5-eed1028378b4
Homo sapiens
|
7'805 cells x 21'506 genes |
h5ad
105 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
45d3098d-7b2b-48a9-9a78-c27f52bd14d8
Mus musculus
|
7'846 cells x 27'368 genes |
h5ad
27.8 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-153723
Drosophila melanogaster
|
7'851 cells |
h5ad
212 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP280
|
7'871 cells x 27'877 genes |
counts_table
61.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c8d5ec85-b174-449e-a3bc-2b8cd84c13c5
Mus musculus
|
7'871 cells x 29'286 genes |
h5ad
19.7 MB
|
Not in ASAP | Details |
|
hca
sc
|
a83b7f45-bfb1-4c6a-97e9-8e3370065cc1::e336a118-d7ab-4c8f-898b-d7a5fa81c2dd
Homo sapiens
|
7'926 cells |
h5
30.7 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2293
Mus musculus
|
7'949 cells x 20'250 genes |
counts_table
209 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-CURD-117
Mus musculus
|
7'966 cells |
h5ad
187 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-9061
Mus musculus
|
7'970 cells |
h5ad
186 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1a0610d8-1339-479b-b261-7fb586c3dab9
Mus musculus
|
7'976 cells x 17'943 genes |
h5ad
100 MB
|
Not in ASAP | Details |