Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
5436f3d8-ca42-4ac7-9b4b-3c399a9bc496
Microcebus murinus
|
8'365 cells x 16'400 genes |
h5ad
46.1 MB
|
Details | |
|
cellxgene
sc
|
824da993-54e5-43b6-bb69-b5b0ca13cc02
Mus musculus
|
8'371 cells x 29'286 genes |
h5ad
24.3 MB
|
Not in ASAP | Details |
|
hca
sc
|
b91c623b-1945-4727-b167-0a93027b0d3f::821e4a30-068d-4c02-89ab-7827d43eeb82
Homo sapiens
|
8'402 cells |
h5
20.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
89528652-74fc-4a58-9aba-ca36b63d9f78
Mus musculus
|
8'425 cells x 27'368 genes |
h5ad
57.9 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-CURD-9
Mus musculus
|
8'429 cells |
h5ad
116 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a43aa46b-bd16-47fe-bc3e-19a052624e79
Homo sapiens
|
8'444 cells x 32'088 genes |
h5ad
62.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b89f6f68-c599-4850-a570-5f1992dbb5ad
Homo sapiens
|
8'461 cells x 32'397 genes |
h5ad
64.3 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8dc858b0-b076-4326-94bb-7c2d1cd721a3
Homo sapiens
|
8'556 cells x 32'375 genes |
h5ad
184 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
ed11cc3e-2947-407c-883c-c53b043917c3
Homo sapiens
|
8'573 cells x 58'232 genes |
h5ad
106 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1fe63353-9e75-4824-aa30-ed8d84be748c
Mus musculus
|
8'613 cells x 17'943 genes |
h5ad
141 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
59841c13-ab79-46ba-94bd-12b01e61e708
Homo sapiens
|
8'643 cells x 32'383 genes |
h5ad
88.1 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
899e2906-cdb1-4dcc-8dd8-3e3fead6c910
Mus musculus
|
8'647 cells x 30'198 genes |
h5ad
107 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7a419302-772d-4534-bffe-763c95b8c63d
Homo sapiens
|
8'653 cells x 35'477 genes |
h5ad
90.5 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1406
Mus musculus
|
8'657 cells x 27'640 genes |
counts_table
553 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d42cadbf-b907-49dc-9565-fedba8fccedc
Homo sapiens
|
8'678 cells x 35'477 genes |
h5ad
117 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-175929
Danio rerio
|
8'701 cells |
h5ad
159 MB
|
Not in ASAP | Details |
|
hca
sc
|
dcbb50d1-9acf-4f70-9fda-b1f63a948c49::3c4a0119-dac5-433f-af38-dbfdfceb0eea
Homo sapiens
|
8'710 cells |
h5ad
39.7 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7432b873-1e96-4a8a-b97b-8921937f4afe
Homo sapiens
|
8'715 cells x 15'221 genes |
h5ad
32.1 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
26a5867a-906d-4753-a186-e3878ed91c6a
Mus musculus
|
8'720 cells x 29'286 genes |
h5ad
25.3 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f54647ec-0c03-4775-8dac-5a477c10a3f5
Homo sapiens
|
8'753 cells x 19'517 genes |
h5ad
55.2 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-6505
Homo sapiens
|
8'778 cells |
h5ad
245 MB
|
Not in ASAP | Details |
|
hca
sc
|
9d97f01f-9313-416e-9b07-560f048b2350::65c905b7-34ea-423b-9e0c-e3f3c6ae1e4b
Homo sapiens
|
8'779 cells |
h5
22.7 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b02891d3-cff8-457e-928c-c483e5d93e69
Mus musculus
|
8'804 cells x 29'286 genes |
h5ad
17.1 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2db80173-2bbb-499c-9161-dff672eb12e9
Homo sapiens
|
8'811 cells x 32'624 genes |
h5ad
96.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2b1a5c88-74d2-4dd9-95bc-c26c0e4b5475
Mus musculus
|
8'847 cells x 29'286 genes |
h5ad
28.9 MB
|
Not in ASAP | Details |