Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
c4dd26a8-d956-4bee-a233-44b573f2ce27
Homo sapiens
|
11'265 cells x 58'232 genes |
h5ad
220 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
274968bf-96bf-4670-a85b-afe1cebb7c7d
Homo sapiens
|
11'272 cells x 35'477 genes |
h5ad
157 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
740da922-4b53-48f2-9713-bf874c14f12b
Mus musculus
|
11'298 cells x 29'286 genes |
h5ad
31.2 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d9ecdf7b-e5f9-459e-a7da-e918748cfdfe
Homo sapiens
|
11'312 cells x 17'902 genes |
h5ad
171 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2423ce2c-3149-4cca-a2ff-cf682ea29b5f
Homo sapiens
|
11'376 cells x 60'606 genes |
h5ad
429 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d319af7f-be2e-441e-8caa-3b8a88480e89
Homo sapiens
|
11'404 cells x 32'040 genes |
h5ad
288 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP269
|
11'416 cells x 16'331 genes |
counts_table
37.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
71e44b30-83b6-455c-a161-bc04c9898f00
Homo sapiens
|
11'430 cells x 15'939 genes |
h5ad
46.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
3e577301-52d1-4db9-89d7-96871ad3950b
Mus musculus
|
11'433 cells x 29'286 genes |
h5ad
24.2 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
90ef2377-e4d0-41c7-924f-6f9ee7a9237d
Homo sapiens
|
11'456 cells x 22'676 genes |
h5ad
9.25 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a6347c54-9e69-45e4-b1db-f5d84aa8321a
Homo sapiens
|
11'484 cells x 15'705 genes |
h5ad
59.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c62ac8e5-72d1-48d1-8bb5-9e66fd2b1e19
Mus musculus
|
11'510 cells x 20'086 genes |
h5ad
10.2 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2708
Mus musculus
|
11'511 cells x 6'786 genes |
h5ad
742 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
db59611b-42de-4035-93aa-1ed39f38b467
Homo sapiens
|
11'574 cells x 32'393 genes |
h5ad
118 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d1519e1d-9471-499b-bb4d-6bc51275a03f
Mus musculus
|
11'608 cells x 29'286 genes |
h5ad
34.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
aad97cb5-f375-45ef-ae9d-178e7f5d5180
Homo sapiens
|
11'617 cells x 30'172 genes |
h5ad
769 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
258c733f-4eb9-4d1d-b9fa-0d09e5c80787
Mus musculus
|
11'730 cells x 29'286 genes |
h5ad
31.3 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-6487
Mus musculus
|
11'736 cells |
h5ad
234 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9cb9eaa8-cccf-41cd-995e-77c0993a287b
Mus musculus
|
11'756 cells x 29'286 genes |
h5ad
28.8 MB
|
Not in ASAP | Details |
|
matkp
sc
|
SingleCell_Li2022_Mouse_SCP708_WC_EPI
Mus musculus
|
11'828 cells |
zip
34.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9c5f68fc-860f-414b-99c2-cc6be691aff3
Homo sapiens
|
11'851 cells x 15'517 genes |
h5ad
36.4 MB
|
Not in ASAP | Details |
|
matkp
sc
|
snRNA_Holman2023_Mouse
Mus musculus
|
11'856 cells |
zip
96.3 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-10628
Drosophila melanogaster
|
11'899 cells |
h5ad
150 MB
|
Not in ASAP | Details |
|
hca
sc
|
b91c623b-1945-4727-b167-0a93027b0d3f::67132a42-7184-4b0f-bb83-f2f7c2be6375
Homo sapiens
|
11'900 cells |
h5
29.7 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
09439621-02d4-4d44-a3a1-1d8b61d93be0
Danio rerio
|
11'964 cells x 32'031 genes |
h5ad
14.7 MB
|
Not in ASAP | Details |