Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
82c9a9e2-36ea-459b-9c56-c104ccda7251
Danio rerio
|
16'596 cells x 32'031 genes |
h5ad
20 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
599504e5-d4ad-45bd-9128-823faf0fb9c9
Homo sapiens
|
16'602 cells x 58'232 genes |
h5ad
272 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
43560d7c-acd6-4ede-830d-c9ffc6cd0862
Homo sapiens
|
16'665 cells x 32'596 genes |
h5ad
122 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1a974af7-8b4b-4abb-8aba-23e2979d9518
Homo sapiens
|
16'668 cells x 18'736 genes |
h5ad
1.52 GB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-10485
Homo sapiens
|
16'694 cells |
h5ad
711 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
86282760-5099-4c71-8cdd-412dcbbbd0b9
Homo sapiens
|
16'743 cells x 32'088 genes |
h5ad
218 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
35c8a04c-8639-4d15-8228-765d8d93fc96
Homo sapiens
|
16'753 cells x 58'232 genes |
h5ad
184 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
179f3dd0-b3b5-4e98-9163-9c628896bb28
Mus musculus
|
16'761 cells x 27'368 genes |
h5ad
91.3 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-CURD-118
Mus musculus
|
16'779 cells |
h5ad
438 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1c224f30-a9c4-48c6-951d-8d86c0a2886e
Mus musculus
|
16'787 cells x 18'183 genes |
h5ad
6.7 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7aca1b0a-ea94-4a32-b011-e7467a8a75ef
Mus musculus
|
16'818 cells x 20'370 genes |
h5ad
14.3 MB
|
Not in ASAP | Details |
|
hca
sc
|
c0518445-3b3b-49c6-b8fc-c41daa4eacba::477218b6-b8ff-41e0-851e-60649a290917
Homo sapiens
|
16'873 cells |
h5ad
402 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0fdb6122-4600-40f0-a703-2da47cc7080d
Homo sapiens
|
16'878 cells x 32'383 genes |
h5ad
68.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d7d7e89c-c93a-422d-8958-9b4a90b69558
Homo sapiens
|
16'901 cells x 17'597 genes |
h5ad
138 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
52069da9-5f98-4ae3-8b2f-514afe3ca00f
Mus musculus
|
16'931 cells x 27'368 genes |
h5ad
87.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f9a73f33-3259-4af0-b95d-528ef4e0f2ee
Callithrix jacchus
|
16'944 cells x 12'150 genes |
h5ad
188 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5936d5c6-faba-46e8-93eb-c5d67d534612
Callithrix jacchus
|
16'956 cells x 12'643 genes |
h5ad
213 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-125970
Homo sapiens
|
17'021 cells |
h5ad
568 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9a00b374-20f8-4ba6-89f2-767d8fbef1da
Mus musculus
|
17'029 cells x 29'286 genes |
h5ad
45 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-10553
Homo sapiens
|
17'123 cells |
h5ad
447 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5e73d977-8e54-4406-a5f0-711bf0d3c228
Mus musculus
|
17'138 cells x 20'707 genes |
h5ad
9.95 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-9906
Homo sapiens
|
17'193 cells |
h5ad
567 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
3241c34f-581a-4de3-81fe-28e3de182680
Homo sapiens
|
17'308 cells x 35'477 genes |
h5ad
143 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1404
Mus musculus
|
17'331 cells x 27'082 genes |
counts_table
1.01 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f9f63905-34b2-4c61-b747-1df6c7a35a6a
Mus musculus
|
17'363 cells x 19'299 genes |
h5ad
11.4 MB
|
Not in ASAP | Details |