Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
broad_scp
sc
|
SCP2151
Homo sapiens
|
17'375 cells x 16'880 genes |
h5ad
819 MB
|
Not in ASAP | Details |
|
hca
sc
|
b91c623b-1945-4727-b167-0a93027b0d3f::4fc4156f-380b-4f69-a1ac-89a8c900e02a
Homo sapiens
|
17'384 cells |
h5
30.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8fcf0ccc-67b2-43a3-90be-075f85169bef
Homo sapiens
|
17'451 cells x 20'893 genes |
h5ad
130 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2038
Mus musculus
|
17'512 cells x 32'454 genes |
h5ad
260 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9038a71d-81a7-4bc7-82c2-186c26d5c3d6
Homo sapiens
|
17'528 cells x 32'375 genes |
h5ad
136 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8039c63d-08b0-4fc9-af0f-5b57f08ca0da
Homo sapiens
|
17'535 cells x 58'232 genes |
h5ad
92.7 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
cb98738b-754d-4730-8cb5-00517f10fbdb
Mus musculus
|
17'586 cells x 27'368 genes |
h5ad
104 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
03168b24-5c11-4b2b-a027-d5f85246bddf
Mus musculus
|
17'587 cells x 29'286 genes |
h5ad
45.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
fe934662-dd0e-471d-b535-d61e1c49860d
Danio rerio
|
17'598 cells x 32'031 genes |
h5ad
19.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
02faf712-92d4-4589-bec7-13105059cf86
Homo sapiens
|
17'612 cells x 22'833 genes |
h5ad
14 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2e342ea5-30e2-4149-b41e-e74f0ed5c72e
Mus musculus
|
17'613 cells x 27'368 genes |
h5ad
111 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
fd89be61-2869-4342-a86e-e1fce3a8f269
Homo sapiens
|
17'622 cells x 32'330 genes |
h5ad
254 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP879
|
17'627 cells x 27 genes |
counts_table
209 KB
|
Not in ASAP | Details |
|
cellxgene
sc
|
bbfd6ac8-7b26-4390-91fe-26d370ba3fcb
Mus musculus
|
17'628 cells x 27'368 genes |
h5ad
106 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
fbf173f9-f809-4d84-9b65-ae205d35b523
Homo sapiens
|
17'660 cells x 58'232 genes |
h5ad
134 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6ebb6e9b-efd0-4e02-a49a-4bf3c732203b
Homo sapiens
|
17'704 cells x 25'697 genes |
h5ad
25.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
83caa705-a765-4f99-9bf2-1d8b01674104
Homo sapiens
|
17'706 cells x 32'088 genes |
h5ad
161 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-10945
Mus musculus
|
17'745 cells |
h5ad
435 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
53ea4f06-0319-4b13-8e9d-e2581023aab7
Homo sapiens
|
17'777 cells x 25'228 genes |
h5ad
25.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0041b9c3-6a49-4bf7-8514-9bc7190067a7
Homo sapiens
|
17'786 cells x 60'606 genes |
h5ad
485 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
dc30c3ec-46d6-4cd8-8ec1-b544a3d0f503
Homo sapiens
|
17'799 cells x 20'110 genes |
h5ad
43.2 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
bb5f4b01-a8ea-47da-a6c7-3e71934d0f8e
Callithrix jacchus
|
17'891 cells x 12'670 genes |
h5ad
260 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4ebe33a1-c8ba-4238-9724-bd8b3a977521
Homo sapiens
|
17'909 cells x 24'157 genes |
h5ad
29 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP889
|
17'911 cells x 22 genes |
counts_table
539 KB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8dc29642-be06-46dc-a289-8075915745d4
Homo sapiens
|
17'962 cells x 22'808 genes |
h5ad
169 MB
|
Not in ASAP | Details |