Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
ed419b4e-db9b-40f1-8593-68fdf8dfb076
Homo sapiens
|
18'011 cells x 30'172 genes |
h5ad
1.34 GB
|
Not in ASAP | Details |
|
hca
sc
|
08fb10df-32e5-456c-9882-e33fcd49077a::2979f9ce-3826-4571-9ba9-dd864d4e4182
Homo sapiens
|
18'044 cells |
h5
29.4 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-8656
Mus musculus
|
18'085 cells |
h5ad
449 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8212b2bd-b6b1-4159-8c18-cbe3804aaa1f
Danio rerio
|
18'100 cells x 32'031 genes |
h5ad
23 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
607e7a20-f623-4150-93d5-b7ebc0af6fbf
Mus musculus
|
18'162 cells x 20'108 genes |
h5ad
15.4 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-10221
Mus musculus
|
18'186 cells |
h5ad
584 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP140
|
18'194 cells x 30'341 genes |
counts_table
255 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-7703
Mus musculus
|
18'264 cells |
h5ad
514 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
ee0b378d-d327-4c7d-baa6-28f062767c61
Mus musculus
|
18'297 cells x 27'368 genes |
h5ad
113 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP880
|
18'375 cells x 26 genes |
counts_table
97.3 KB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0737011b-45a6-49f6-8b5a-b85c35160bac
Homo sapiens
|
18'377 cells x 24'884 genes |
h5ad
25.1 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4b6af54a-4a21-46e0-bc8d-673c0561a836
Homo sapiens
|
18'386 cells x 23'775 genes |
h5ad
245 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c19275f5-739e-4796-ad5d-b0830b760db1
Homo sapiens
|
18'402 cells x 35'483 genes |
h5ad
618 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-8911
Homo sapiens
|
18'439 cells |
h5ad
462 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8c275f25-d8d9-40b2-a81d-498bf89c4677
Homo sapiens
|
18'471 cells x 24'613 genes |
h5ad
33.7 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
04c0bdd8-840f-488e-b72d-2a1229bc65db
Homo sapiens
|
18'524 cells x 32'088 genes |
h5ad
252 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
34cd019c-c79d-4f4f-8f95-8934062dc132
Mus musculus
|
18'542 cells x 20'104 genes |
h5ad
11.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4ea886a2-077b-43c7-9f49-b82c81351798
Mus musculus
|
18'568 cells x 20'038 genes |
h5ad
21.1 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
cc239a08-5e57-4945-b8a7-9fcb5ce4a7ab
Mus musculus
|
18'585 cells x 27'368 genes |
h5ad
102 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-HCAD-31
Homo sapiens
|
18'694 cells |
h5ad
376 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f20f44ef-a0d4-4d94-87de-037fd47141f0
Homo sapiens
|
18'728 cells x 58'232 genes |
h5ad
200 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6a7c4462-334e-45a4-8aa4-28d3733bbbac
Homo sapiens
|
18'730 cells x 25'018 genes |
h5ad
21.3 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
bad6524a-f122-4e9f-927c-cc7776674d5e
Homo sapiens
|
18'772 cells x 35'377 genes |
h5ad
107 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-8205
Homo sapiens
|
18'829 cells |
h5ad
947 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6d243918-f3f6-4a9e-b72e-39d96de73095
Homo sapiens
|
18'851 cells x 25'066 genes |
h5ad
19.6 MB
|
Not in ASAP | Details |