Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
broad_scp
sc
|
SCP1792
Homo Sapiens
|
19'603 cells x 998 genes |
rds
11.3 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP3227
Homo sapiens
|
19'632 cells |
h5ad
1.5 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP872
|
19'659 cells x 22 genes |
counts_table
158 KB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d5c67a4e-a8d9-456d-a273-fa01adb1b308
Homo sapiens
|
19'694 cells x 36'475 genes |
h5ad
179 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4e374783-0152-423e-bcb6-b87cc232f64d
Homo sapiens
|
19'711 cells x 18'736 genes |
h5ad
1.68 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f15e263b-6544-46cb-a46e-e33ab7ce8347
Homo sapiens
|
19'722 cells x 20'399 genes |
h5ad
153 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1179
Mus musculus
|
19'724 cells x 13'869 genes |
counts_table
801 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
babbf9f3-f482-45a5-ba76-c41f4c2f503e
Homo sapiens
|
19'768 cells x 55'446 genes |
h5ad
237 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
31d8129f-1957-4888-8fad-69159a9e5e33
Mus musculus
|
19'781 cells x 27'368 genes |
h5ad
124 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a5ab6cde-46d4-4667-9b32-cfce54fa7a4e
Mus musculus
|
19'847 cells x 16'966 genes |
h5ad
277 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-8559
Homo sapiens
|
19'880 cells |
h5ad
766 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4f420bc4-b9cd-4e14-a1d2-51d76f776374
Mus musculus
|
19'886 cells x 20'170 genes |
h5ad
17.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9df60c57-fdf3-4e93-828e-fe9303f20438
Homo sapiens
|
19'985 cells x 32'383 genes |
h5ad
154 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d9b4bc69-ed90-4f5f-99b2-61b0681ba436
Homo sapiens
|
20'000 cells x 23'337 genes |
h5ad
147 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-114530
Homo sapiens
|
20'000 cells |
h5ad
555 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-7869
Mus musculus
|
20'002 cells |
h5ad
398 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f339fe89-c99c-4f50-b76d-2ffe9d376500
Homo sapiens
|
20'021 cells x 23'515 genes |
h5ad
17 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
03d38670-1444-4001-bc53-9936e61d9b20
Homo sapiens
|
20'027 cells x 58'232 genes |
h5ad
159 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4dbc3399-8272-43c4-b6fd-9d7c983e62bb
Mus musculus
|
20'055 cells x 19'187 genes |
h5ad
15.3 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
856c1b98-5727-49da-bf0f-151bdb8cb056
Homo sapiens
|
20'091 cells x 19'263 genes |
h5ad
52.1 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a5b5d1f3-dd8b-44f6-a685-15f0f741c062
Homo sapiens
|
20'162 cells x 58'232 genes |
h5ad
74.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
51e353b3-c8fe-4e8c-b912-e75c9bc28a66
Homo sapiens
|
20'245 cells x 26'697 genes |
h5ad
31.1 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-ENAD-53
Solanum lycopersicum
|
20'278 cells |
h5ad
374 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
df4c4fdc-756a-4147-a6a0-9c101f62eced
Mus musculus
|
20'320 cells x 19'303 genes |
h5ad
15.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
32e8a3d7-7b15-4f80-a0ff-6d2fc531e972
Homo sapiens
|
20'321 cells x 32'375 genes |
h5ad
133 MB
|
Not in ASAP | Details |