Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
c2dec445-4116-4b6d-9253-a73f9516460f
Homo sapiens
|
20'868 cells x 26'003 genes |
h5ad
41.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7c625d8b-f2e3-4b27-8a8f-1d61e58ceae7
Mus musculus
|
20'886 cells x 21'342 genes |
h5ad
18.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
39f6fec9-2539-4b99-982b-f12888ef649a
Homo sapiens
|
20'916 cells x 26'100 genes |
h5ad
156 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5a73f63f-18a2-49b5-b431-2c469c41a41b
Homo sapiens
|
20'916 cells x 58'232 genes |
h5ad
298 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP97
|
20'921 cells x 19'743 genes |
counts_table
371 MB
|
Not in ASAP | Details |
|
hca
sc
|
cc95ff89-2e68-4a08-a234-480eca21ce79::4d47a49b-ee0e-4fb9-8064-185dc4d4de48
Homo sapiens
|
20'989 cells |
h5ad
351 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
50c4a6d6-940b-4c6a-a376-aea2ae2d3168
Homo sapiens
|
21'003 cells x 27'933 genes |
h5ad
19.9 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP851
|
21'011 cells x 22 genes |
counts_table
2.15 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-135922
Homo sapiens
|
21'022 cells |
h5ad
737 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5ee552f5-834c-4766-92c8-5a09dfd45767
Homo sapiens
|
21'026 cells x 25'344 genes |
h5ad
295 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d77ec7d6-ef2e-49d6-9e79-05b7f8881484
Homo sapiens
|
21'030 cells x 60'606 genes |
h5ad
858 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7178ec0a-b0e2-45b1-beb0-879bb69d81e9
Homo sapiens
|
21'049 cells x 27'898 genes |
h5ad
273 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
99c400af-2a21-4937-9b84-cc1e52f7ba09
Homo sapiens
|
21'054 cells x 25'560 genes |
h5ad
21.2 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c5ac9bb9-9597-4c0e-a985-1c3947288785
Mus musculus
|
21'181 cells x 19'032 genes |
h5ad
7.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
74c527f9-80c2-48bc-a262-88bca203a922
Homo sapiens
|
21'225 cells x 35'477 genes |
h5ad
223 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP3759
Mus musculus
|
21'256 cells x 19'054 genes |
rds
3.14 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
00e5dedd-b9b7-43be-8c28-b0e5c6414a62
Homo sapiens
|
21'422 cells x 30'172 genes |
h5ad
1.3 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e8ac3386-31d4-48ba-aa70-1bae0cf020e7
Homo sapiens
|
21'443 cells x 35'483 genes |
h5ad
517 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1a018108-b4b6-457b-ba15-046d5e98c169
Homo sapiens
|
21'534 cells x 58'232 genes |
h5ad
122 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-146122
Mus musculus
|
21'589 cells |
h5ad
768 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7970bd6b-f752-47a9-8643-2af16855ec49
Homo sapiens
|
21'595 cells x 19'517 genes |
h5ad
165 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b8c618e5-4b3d-4566-8a3f-7e40047f5c54
Mus musculus
|
21'647 cells x 17'943 genes |
h5ad
328 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-HCAD-11
Homo sapiens
|
21'664 cells |
h5ad
584 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b17a491e-0157-462e-b611-fdcde893d05d
Mus musculus
|
21'814 cells x 20'112 genes |
h5ad
17.2 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-HCAD-5
Homo sapiens
|
21'846 cells |
h5ad
744 MB
|
Not in ASAP | Details |