Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
eb602a88-fff3-488f-995d-3b0d967593b3
Mus musculus
|
21'894 cells x 19'534 genes |
h5ad
14.2 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2660
Homo sapiens
|
21'940 cells x 24'073 genes |
rds
698 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
12194ced-8086-458e-84a8-e2ab935d8db1
Homo sapiens
|
21'968 cells x 32'902 genes |
h5ad
205 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6ec405bb-4727-4c6d-ab4e-01fe489af7ea
Homo sapiens
|
22'029 cells x 60'606 genes |
h5ad
855 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
02aa7750-ed05-4eca-8061-766c68a81a22
Homo sapiens
|
22'033 cells x 17'478 genes |
h5ad
63.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
2856d06c-0ff9-4e01-bfc9-202b74d0b60f
Homo sapiens
|
22'048 cells x 33'295 genes |
h5ad
294 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
db4a9ed2-e994-40c1-b7ec-4091fdf7b6c1
Sus scrofa domesticus
|
22'056 cells x 15'487 genes |
h5ad
266 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-10885
Homo sapiens
|
22'063 cells |
h5ad
671 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
fa49ae21-e7fc-42b6-ade3-a4c1bb6ad574
Mus musculus
|
22'066 cells x 31'729 genes |
h5ad
428 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a9f69075-aa4f-44f4-bb6b-07504ed450de
Microcebus murinus
|
22'067 cells x 16'400 genes |
h5ad
105 MB
|
Details | |
|
cellxgene
sc
|
bc7260e0-54cf-4b0b-823d-93f5b850f757
Homo sapiens
|
22'125 cells x 32'040 genes |
h5ad
141 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1933
Mus musculus
|
22'155 cells x 18'772 genes |
counts_table
51.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0a1b0fc9-2167-4cd3-85c6-379f0fdab8be
Mus musculus
|
22'157 cells x 20'835 genes |
h5ad
19.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5ae6ab72-1927-4d5b-9826-86be65791293
Homo sapiens
|
22'168 cells x 35'483 genes |
h5ad
424 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP886
|
22'175 cells x 27 genes |
counts_table
258 KB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6384d8b8-8511-4ffb-b543-26dc8dd5967a
Homo sapiens
|
22'188 cells x 16'294 genes |
h5ad
48 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6d41668c-168c-4500-b06a-4674ccf3e19d
Homo sapiens
|
22'214 cells x 60'606 genes |
h5ad
796 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
7a1d54e5-901d-4280-b77d-b87cf172292d
Homo sapiens
|
22'227 cells x 35'477 genes |
h5ad
247 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1489
Rattus norvegicus
|
22'288 cells x 16'558 genes |
counts_table
1.1 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4b83f213-b96b-4c87-a884-9b81faddb194
Homo sapiens
|
22'370 cells x 31'752 genes |
h5ad
109 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
28c696bb-9549-434b-9340-dc745a846f9a
Mus musculus
|
22'375 cells x 35'126 genes |
h5ad
1.26 GB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP495
|
22'397 cells x 36'296 genes |
counts_table
1.63 GB
|
Not in ASAP | Details |
|
cellxgene
sc
|
3e4e2c8e-cd17-4ece-9141-1e7f4ce8da1f
Homo sapiens
|
22'414 cells x 23'249 genes |
h5ad
111 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
230eeeee-5640-49ef-99a2-9d2fd001ea06
Mus musculus
|
22'430 cells x 20'582 genes |
h5ad
21.3 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1831d86a-0cdb-4a41-b410-6687370a4620
Mus musculus
|
22'458 cells x 20'150 genes |
h5ad
14.2 MB
|
Not in ASAP | Details |