External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

211'441'407
Reset 16849 candidates
Source Dataset Matrix Format ASAP Actions
hca
sc
e956e66a-ac8e-483a-963a-0f92c7e5abfb::2ade0a3f-e4f7-4b22-bd54-34620ad94530
Homo sapiens
mtx
478 MB
Not in ASAP Details
hca
sc
e9f36305-d857-44a3-93f0-df4e6007dc97::59435f2e-14c5-4485-ab1b-2f85c25c8228
Homo sapiens
h5
482 MB
Not in ASAP Details
hca
sc
9d97f01f-9313-416e-9b07-560f048b2350::18c02c1d-14a5-5e36-80d6-221408cd12fc
Homo sapiens
loom
483 MB
Not in ASAP Details
hubmap
sc
HBM444.DXLZ.643
Homo sapiens
h5ad
484 MB
Not in ASAP Details
hubmap
sc
HBM395.WSDD.355
Homo sapiens
h5ad
484 MB
Not in ASAP Details
geo
sc
GSE296378
Mus musculus
mtx
484 MB
Not in ASAP Details
geo
sc
GSE326782
Mus musculus
mtx
485 MB
Not in ASAP Details
hca
sc
daef3fda-2620-45ae-a3f7-1613814a35bf::dabbb209-21b9-4336-8899-8d7b1abfc9ee
Homo sapiens
h5
485 MB
Not in ASAP Details
geo
sc
GSE327289
Homo sapiens
rds
486 MB
Not in ASAP Details
hca
sc
3089d311-f9ed-44dd-bb10-397059bad4dc::917af817-d229-580f-9b0a-a79c8fceb84a
Homo sapiens
loom
486 MB
Not in ASAP Details
hca
sc
c1810dbc-16d2-45c3-b45e-3e675f88d87b::3775cc67-352e-53af-902e-58fb7dda6a1a
Homo sapiens
loom
486 MB
Not in ASAP Details
hca
sc
559bb888-7829-41f2-ace5-2c05c7eb81e9::6e061337-810d-5089-a923-7bed3d1384cc
Homo sapiens
loom
487 MB
Not in ASAP Details
hca
sc
e9f36305-d857-44a3-93f0-df4e6007dc97::e59a3b0c-4296-4cd4-b5d3-c5319a1851b7
Homo sapiens
h5
487 MB
Not in ASAP Details
hca
sc
2086eb05-10b9-432b-b7f0-169ccc49d270::8fe4f01e-997b-5fc4-982d-25cc55c0ebc7
Mus musculus
loom
488 MB
Not in ASAP Details
hca
sc
c1810dbc-16d2-45c3-b45e-3e675f88d87b::54147d07-2a06-58c5-80eb-01b5b042c897
Homo sapiens
loom
488 MB
Not in ASAP Details
hca
sc
b4a7d12f-6c2f-40a3-9e35-9756997857e3::e0ed14f1-16cc-5d03-be38-9d78f00f111a
Mus musculus
loom
495 MB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::443537fe-0272-5395-8b87-ae79fd5ab309
Homo sapiens
loom
496 MB
Not in ASAP Details
hca
sc
925f9a4c-cac0-444a-ad2c-612656ab3a85::61db8052-2cb1-42c2-8dc9-5a475bdb832e
Homo sapiens
h5ad
500 MB
Not in ASAP Details
hca
sc
cc95ff89-2e68-4a08-a234-480eca21ce79::8e2b004c-ac63-50c7-8356-2667ddfc051b
Homo sapiens
loom
501 MB
Not in ASAP Details
hca
sc
83f5188e-3bf7-4956-9544-cea4f8997756::0099d028-690b-51b3-ad25-aa1537aa63b7
Homo sapiens
h5ad
503 MB
Not in ASAP Details
hca
sc
fcaa53cd-ba57-4bfe-af9c-eaa958f95c1a::bb145a01-1dd8-42bf-9919-44c4bb112a21
Homo sapiens
h5ad
504 MB
Not in ASAP Details
hca
sc
3089d311-f9ed-44dd-bb10-397059bad4dc::b4f497dd-9534-55e1-a092-418987d7be1e
Homo sapiens
loom
505 MB
Not in ASAP Details
hca
sc
5b5f05b7-2482-468d-b76d-8f68c04a7a47::43f66117-7fc4-50d5-92f5-5e1b82c32244
Homo sapiens
loom
506 MB
Not in ASAP Details
broad_scp
sc
SCP1648
Homo sapiens
counts_table
507 MB
Not in ASAP Details
hubmap
sc
HBM582.CXXZ.438
Homo sapiens
h5ad
508 MB
Not in ASAP Details
of 674