External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

211'441'407
Reset 16849 candidates
Source Dataset Matrix Format ASAP Actions
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::62122017-473d-573b-80c4-5fcb983400fa
Homo sapiens
loom
2.5 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::c81825c9-de10-518f-90e2-ba934644b488
Homo sapiens
loom
2.57 GB
Not in ASAP Details
hca
sc
24c654a5-caa5-440a-8f02-582921f2db4a::8e9ecc58-486f-5e68-b141-040065745a3d
Homo sapiens
loom
2.59 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::aabb1e90-cfb3-5f91-9ca0-3619aab81eab
Homo sapiens
loom
2.59 GB
Not in ASAP Details
geo
sc
GSE334840
Homo sapiens
h5ad
2.6 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::a50dd6a0-b1a4-5001-b21c-800e31c09c8b
Homo sapiens
loom
2.61 GB
Not in ASAP Details
hca
sc
cae461de-ecbd-482f-a5d4-11d607fc12ba::e2314369-8d71-407e-a874-b544d3a6c1e9
Homo sapiens
mtx
2.61 GB
Not in ASAP Details
geo
sc
GSE315106
Mus musculus
rds
2.62 GB
Not in ASAP Details
hca
sc
95f07e6e-6a73-4e1b-a880-c83996b3aa5c::baaefaa2-c907-557d-8969-bbd66ac4f144
Homo sapiens
loom
2.62 GB
Not in ASAP Details
hca
sc
07073c12-8006-4710-a00b-23abdb814904::efa86e27-2eae-5373-add7-8925075b1312
Homo sapiens
loom
2.64 GB
Not in ASAP Details
hca
sc
95f07e6e-6a73-4e1b-a880-c83996b3aa5c::08d974ad-6498-5560-acf5-80c21a3fa2f8
Homo sapiens
loom
2.66 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::6cc4fb9f-a1b5-5689-9708-10bf278d183c
Homo sapiens
loom
2.66 GB
Not in ASAP Details
hca
sc
07073c12-8006-4710-a00b-23abdb814904::dbdd9a3d-d6ec-5efb-99f6-462fd3ccde65
Homo sapiens
loom
2.66 GB
Not in ASAP Details
hca
sc
cae461de-ecbd-482f-a5d4-11d607fc12ba::8ce5f6bf-2ac0-42dc-be77-a6ba83f9e913
Homo sapiens
mtx
2.67 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::14dcb5c4-a2bd-598a-9aaa-4de7ee900eec
Homo sapiens
loom
2.69 GB
Not in ASAP Details
allen_abc
sc
WMB-10Xv2-HY
Mus musculus
h5ad
2.71 GB
Not in ASAP Details
hca
sc
4bec484d-ca7a-47b4-8d48-8830e06ad6db::37a0c021-a9ea-536a-a022-6477d6edb9ad
Homo sapiens
loom
2.75 GB
Not in ASAP Details
geo
sc
GSE254260
Homo sapiens
rds
2.75 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::29b78a51-0501-50ad-a60b-08c1ba73d622
Homo sapiens
loom
2.76 GB
Not in ASAP Details
hca
sc
04e4292c-f62f-4098-ae9b-fd69ae002a90::d4bb7153-18e3-4b87-9e35-2e2c00172e8e
Homo sapiens
h5ad
2.77 GB
Not in ASAP Details
hca
sc
4bec484d-ca7a-47b4-8d48-8830e06ad6db::53440491-0821-5fa0-b80a-b807a67d7df2
Homo sapiens
loom
2.77 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::43a2a11e-1665-5e63-b426-0742798bcb09
Homo sapiens
loom
2.77 GB
Not in ASAP Details
hca
sc
07073c12-8006-4710-a00b-23abdb814904::9920efdf-3c14-518a-b87c-8212caa03aa6
Homo sapiens
loom
2.79 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::38d54df2-3758-5a47-a77b-84264c06c07c
Homo sapiens
loom
2.79 GB
Not in ASAP Details
geo
sc
GSE300791
Homo sapiens
mtx
2.8 GB
Not in ASAP Details
of 674