External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

211'441'407
Reset 16849 candidates
Source Dataset Matrix Format ASAP Actions
hca
sc
04e4292c-f62f-4098-ae9b-fd69ae002a90::af4302e4-d0ea-4ff9-b2d0-34e9697dda8a
Homo sapiens
h5ad
2.8 GB
Not in ASAP Details
hca
sc
07073c12-8006-4710-a00b-23abdb814904::703b239c-af05-5bf2-b861-d68548f3715f
Homo sapiens
loom
2.81 GB
Not in ASAP Details
hca
sc
8c3c290d-dfff-4553-8868-54ce45f4ba7f::40d5e343-6b25-5014-8287-43c414cb962f
Mus musculus
loom
2.81 GB
Not in ASAP Details
geo
sc
GSE288106
Homo sapiens
rds
2.81 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::7136597b-ca6d-52be-91b7-43ed4feccc16
Homo sapiens
loom
2.84 GB
Not in ASAP Details
allen_abc
sc
WMB-10Xv3-OLF
Mus musculus
h5ad
2.9 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::ef0764f1-71a7-56ac-aceb-fd0b07784634
Homo sapiens
loom
2.9 GB
Not in ASAP Details
hca
sc
07073c12-8006-4710-a00b-23abdb814904::4775591f-cb47-5c5f-b69f-b58f089f68ef
Homo sapiens
loom
2.9 GB
Not in ASAP Details
hca
sc
e0009214-c0a0-4a7b-96e2-d6a83e966ce0::fa8b3e12-a03c-536b-a59d-b145048afb04
Mus musculus
loom
2.92 GB
Not in ASAP Details
hca
sc
4bec484d-ca7a-47b4-8d48-8830e06ad6db::fef5bbfc-7381-57d5-b892-6d0edf0d14b5
Homo sapiens
loom
2.92 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::4266c023-fdb5-5a9c-8d5b-8a9e9d7aa9a7
Homo sapiens
loom
2.92 GB
Not in ASAP Details
hca
sc
95f07e6e-6a73-4e1b-a880-c83996b3aa5c::28831ac6-f51c-5628-b03b-4fbf247fb1d4
Homo sapiens
loom
2.93 GB
Not in ASAP Details
hca
sc
8c3c290d-dfff-4553-8868-54ce45f4ba7f::ed16c93a-4278-54ec-9621-63693fc70b25
Mus musculus
loom
2.94 GB
Not in ASAP Details
geo
sc
GSE339453
Homo sapiens
h5ad
2.96 GB
Not in ASAP Details
hca
sc
95f07e6e-6a73-4e1b-a880-c83996b3aa5c::c0767de0-95e0-5238-90c8-d5dea4ad9af0
Homo sapiens
loom
2.97 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::a12bbb0a-2e82-5172-905e-9430234a30ab
Homo sapiens
loom
2.99 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::b0cd671e-a918-51db-ba29-e127caf325c5
Homo sapiens
loom
3.03 GB
Not in ASAP Details
allen_abc
sc
WMB-10Xv3-CTXsp
Mus musculus
h5ad
3.05 GB
Not in ASAP Details
hca
sc
ce7b12ba-664f-4f79-8fc7-3de6b1892183::10197265-4871-5f42-9f6d-0a1b6242553d
Homo sapiens
loom
3.07 GB
Not in ASAP Details
hca
sc
957261f7-2bd6-4358-a6ed-24ee080d5cfc::12d5ada4-6520-4708-a034-49884917a4ea
Homo sapiens
h5ad
3.07 GB
Not in ASAP Details
hca
sc
957261f7-2bd6-4358-a6ed-24ee080d5cfc::0675c0d7-4085-4b39-b061-b132473447d8
Homo sapiens
h5ad
3.07 GB
Not in ASAP Details
geo
sc
GSE317327
Homo sapiens
h5ad
3.11 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::65414983-8961-5a28-b62f-c6837d6ac85d
Homo sapiens
loom
3.12 GB
Not in ASAP Details
geo
sc
GSE296426
Homo sapiens
rds
3.15 GB
Not in ASAP Details
geo
sc
GSE335480
Homo sapiens
rds
3.16 GB
Not in ASAP Details
of 674