External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

211'441'407
Reset 18884 candidates
Source Dataset Matrix Format ASAP Actions
hca
sc
b4a7d12f-6c2f-40a3-9e35-9756997857e3::e0ed14f1-16cc-5d03-be38-9d78f00f111a
Mus musculus
loom
495 MB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::443537fe-0272-5395-8b87-ae79fd5ab309
Homo sapiens
loom
496 MB
Not in ASAP Details
hca
sc
925f9a4c-cac0-444a-ad2c-612656ab3a85::61db8052-2cb1-42c2-8dc9-5a475bdb832e
Homo sapiens
h5ad
500 MB
Not in ASAP Details
hca
sc
cc95ff89-2e68-4a08-a234-480eca21ce79::8e2b004c-ac63-50c7-8356-2667ddfc051b
Homo sapiens
loom
501 MB
Not in ASAP Details
hca
sc
83f5188e-3bf7-4956-9544-cea4f8997756::0099d028-690b-51b3-ad25-aa1537aa63b7
Homo sapiens
h5ad
503 MB
Not in ASAP Details
hca
sc
fcaa53cd-ba57-4bfe-af9c-eaa958f95c1a::bb145a01-1dd8-42bf-9919-44c4bb112a21
Homo sapiens
h5ad
504 MB
Not in ASAP Details
hca
sc
3089d311-f9ed-44dd-bb10-397059bad4dc::b4f497dd-9534-55e1-a092-418987d7be1e
Homo sapiens
loom
505 MB
Not in ASAP Details
hca
sc
5b5f05b7-2482-468d-b76d-8f68c04a7a47::43f66117-7fc4-50d5-92f5-5e1b82c32244
Homo sapiens
loom
506 MB
Not in ASAP Details
broad_scp
sc
SCP1648
Homo sapiens
counts_table
507 MB
Not in ASAP Details
hubmap
sc
HBM582.CXXZ.438
Homo sapiens
h5ad
508 MB
Not in ASAP Details
hca
sc
4e6f083b-5b9a-4393-9890-2a83da8188f1::7f1f5cf5-01d1-5e53-a526-c33ed50b8b87
Mus musculus
loom
510 MB
Not in ASAP Details
hca
sc
cae461de-ecbd-482f-a5d4-11d607fc12ba::bc146a9d-282d-46ed-be4f-dda8bd858449
Homo sapiens
mtx
510 MB
Not in ASAP Details
geo
sc
GSE288291
Mus musculus
mtx
511 MB
Not in ASAP Details
hubmap
sc
HBM367.SLVS.253
Homo sapiens
h5ad
514 MB
Not in ASAP Details
hca
sc
3089d311-f9ed-44dd-bb10-397059bad4dc::926b4e02-9773-5148-ad15-95a995f921da
Homo sapiens
loom
515 MB
Not in ASAP Details
hca
sc
b4a7d12f-6c2f-40a3-9e35-9756997857e3::f1f70796-b1a2-5d3f-a824-fe41dff54e2c
Mus musculus
loom
516 MB
Not in ASAP Details
hca
sc
e9f36305-d857-44a3-93f0-df4e6007dc97::474659b9-ec18-4ca6-b932-bb959c8897b3
Homo sapiens
h5
517 MB
Not in ASAP Details
hca
sc
cc95ff89-2e68-4a08-a234-480eca21ce79::69f22279-536e-5240-9d69-a7956b43d5e4
Homo sapiens
loom
517 MB
Not in ASAP Details
hca
sc
455b46e6-d8ea-4611-861e-de720a562ada::198868da-97b2-538a-aef6-24d96ae9ba5e
Homo sapiens
loom
517 MB
Not in ASAP Details
hca
sc
38449aea-70b5-40db-84b3-1e08f32efe34::ae16c3cb-9ebb-5aa1-b178-4b2f237a290e
Homo sapiens
loom
518 MB
Not in ASAP Details
hca
sc
0fd8f918-62d6-4b8b-ac35-4c53dd601f71::31919a32-1cac-517e-be97-e11da6663a84
Homo sapiens
loom
519 MB
Not in ASAP Details
hca
sc
455b46e6-d8ea-4611-861e-de720a562ada::452f09db-2122-553d-bc14-19fe17c1e071
Homo sapiens
loom
521 MB
Not in ASAP Details
geo
sc
GSE288699
Mus musculus
rds
524 MB
Not in ASAP Details
geo
sc
GSE335566
Homo sapiens
h5ad
524 MB
Not in ASAP Details
hca
sc
b4a7d12f-6c2f-40a3-9e35-9756997857e3::f22310b2-e8f6-5438-8cdd-24481d0b969c
Mus musculus
loom
524 MB
Not in ASAP Details
of 756