External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

2 – 11'441'407
Reset 18884 candidates
Source Dataset Matrix Format ASAP Actions
hca
sc
3089d311-f9ed-44dd-bb10-397059bad4dc::d31660ed-8b33-5556-b32a-87b6b9a42515
Homo sapiens
β€” loom
587 MB
Not in ASAP Details
hca
sc
f48e7c39-cc67-4055-9d79-bc437892840c::a6b75e35-9adb-5411-9c61-18b714a075e0
Homo sapiens
β€” loom
587 MB
Not in ASAP Details
hca
sc
cc95ff89-2e68-4a08-a234-480eca21ce79::5deea37b-9d57-52a1-8b88-e4d2f7d4b3ec
Homo sapiens
β€” loom
587 MB
Not in ASAP Details
hca
sc
b4a7d12f-6c2f-40a3-9e35-9756997857e3::ac376e30-1f1f-5f8e-9b99-ea9cb5113619
Mus musculus
β€” loom
590 MB
Not in ASAP Details
hca
sc
b4a7d12f-6c2f-40a3-9e35-9756997857e3::f3eb756e-ee29-5166-b93d-ba2518c4d6bb
Mus musculus
β€” loom
591 MB
Not in ASAP Details
hca
sc
b4a7d12f-6c2f-40a3-9e35-9756997857e3::0a8d4d4b-cc24-52a0-8740-f749f2fcaa33
Mus musculus
β€” loom
594 MB
Not in ASAP Details
geo
sc
GSE307632
Homo sapiens
β€” h5ad
595 MB
Not in ASAP Details
hca
sc
3089d311-f9ed-44dd-bb10-397059bad4dc::a8d2dcf2-de5e-5569-b88e-aa67099b61b4
Homo sapiens
β€” loom
597 MB
Not in ASAP Details
hca
sc
3089d311-f9ed-44dd-bb10-397059bad4dc::91cba5d1-7db0-5a55-8122-8e2024011a5f
Homo sapiens
β€” loom
599 MB
Not in ASAP Details
hca
sc
559bb888-7829-41f2-ace5-2c05c7eb81e9::0264fd26-4f63-5a35-a524-d509e0814309
Homo sapiens
β€” loom
600 MB
Not in ASAP Details
hca
sc
38449aea-70b5-40db-84b3-1e08f32efe34::c7c422c2-16a5-53cf-989f-423bd1f63f8e
Homo sapiens
β€” loom
600 MB
Not in ASAP Details
geo
sc
GSE328575
Homo sapiens; Mus musculus
β€” rds
601 MB
Not in ASAP Details
hca
sc
c4077b3c-5c98-4d26-a614-246d12c2e5d7::dfd727a4-6dba-5914-828c-8d5bd35a26a3
Homo sapiens
β€” loom
602 MB
Not in ASAP Details
hca
sc
cc95ff89-2e68-4a08-a234-480eca21ce79::c776dcf6-a937-5a96-acd5-0e1c33756145
Homo sapiens
β€” loom
604 MB
Not in ASAP Details
hca
sc
455b46e6-d8ea-4611-861e-de720a562ada::a0506e5f-11ef-572d-b11f-03b5686a4af4
Homo sapiens
β€” loom
605 MB
Not in ASAP Details
hca
sc
3089d311-f9ed-44dd-bb10-397059bad4dc::b417793a-c7bb-5502-9946-6ac0325a65bd
Homo sapiens
β€” loom
606 MB
Not in ASAP Details
geo
sc
GSE337539
Mus musculus
β€” mtx
607 MB
Not in ASAP Details
hca
sc
e9f36305-d857-44a3-93f0-df4e6007dc97::169b0c84-ceba-4fc4-9548-2171454e1207
Homo sapiens
β€” h5
608 MB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::2e779dc1-87e7-5e5d-b50d-ddff592d1503
Homo sapiens
β€” loom
609 MB
Not in ASAP Details
hca
sc
cc95ff89-2e68-4a08-a234-480eca21ce79::f7d65d65-26d5-5def-903d-2703df7a8e85
Homo sapiens
β€” loom
610 MB
Not in ASAP Details
hca
sc
cc95ff89-2e68-4a08-a234-480eca21ce79::0193f7d2-9876-59bc-8eda-24ed06a2d478
Homo sapiens
β€” loom
610 MB
Not in ASAP Details
hca
sc
b51f49b4-0d2e-4cbd-bbd5-04cd171fc2fa::36ab8b72-bf78-58d9-9b66-e878f3537673
Homo sapiens
β€” loom
610 MB
Not in ASAP Details
hca
sc
8185730f-4113-40d3-9cc3-929271784c2b::a301dcb4-6a8f-5ef8-af7e-6a9fe44058e8
Homo sapiens
β€” loom
610 MB
Not in ASAP Details
geo
sc
GSE297853
Macaca mulatta
β€” rds
610 MB
Not in ASAP Details
hca
sc
3089d311-f9ed-44dd-bb10-397059bad4dc::465003a6-96aa-51f2-9a14-f098f2411103
Homo sapiens
β€” loom
612 MB
Not in ASAP Details
of 756