External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

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Reset 18884 candidates
Source Dataset Matrix Format ASAP Actions
hca
sc
962bd805-eb89-4c54-bad2-008e497d1307::0bc57c99-0b9b-5895-b574-1616f93ee384
Homo sapiens
loom
857 MB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::a93ab50b-2052-532f-b442-b08482e5abe6
Homo sapiens
loom
858 MB
Not in ASAP Details
geo
sc
GSE242213
Mus musculus
rds
859 MB
Not in ASAP Details
hca
sc
abe1a013-af7a-45ed-8c26-f3793c24a1f4::37accfb7-029b-57ba-892f-716f718dc9d2
Homo sapiens
loom
862 MB
Not in ASAP Details
hca
sc
83f5188e-3bf7-4956-9544-cea4f8997756::8548a104-7c86-5c8b-88cd-0afa0c325532
Homo sapiens
loom
862 MB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::b2d44fe5-b51e-502a-9be6-83e0e0cf281f
Homo sapiens
loom
863 MB
Not in ASAP Details
hca
sc
c4077b3c-5c98-4d26-a614-246d12c2e5d7::dce0bbbc-5bc5-5499-947a-726cd6f2b3f7
Homo sapiens
loom
863 MB
Not in ASAP Details
hca
sc
f2fe82f0-4454-4d84-b416-a885f3121e59::38c2cd07-76c0-5a32-95c9-0a2a76eca990
Homo sapiens
loom
864 MB
Not in ASAP Details
hca
sc
f8aa201c-4ff1-45a4-890e-840d63459ca2::15a41a63-ca5d-5a4e-8ae0-9f30aacfc41f
Homo sapiens
loom
864 MB
Not in ASAP Details
geo
sc
GSE317176
Macaca fascicularis
h5ad
865 MB
Not in ASAP Details
hca
sc
38449aea-70b5-40db-84b3-1e08f32efe34::c1f0a3e3-dbc3-5dbb-99e1-627a82691eff
Homo sapiens
loom
868 MB
Not in ASAP Details
hca
sc
e9f36305-d857-44a3-93f0-df4e6007dc97::b964b5bb-88b4-4ac4-b777-47e712832ba1
Homo sapiens
h5
869 MB
Not in ASAP Details
hca
sc
83f5188e-3bf7-4956-9544-cea4f8997756::5f0d8526-c761-5106-b748-2124a2096315
Homo sapiens
loom
870 MB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::92e7052a-ac2f-5993-bf93-14c2860b8190
Homo sapiens
loom
871 MB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::1fd39ffe-269f-5bf6-bf29-bc3c7c117f5a
Homo sapiens
loom
872 MB
Not in ASAP Details
hca
sc
f2fe82f0-4454-4d84-b416-a885f3121e59::5396c76e-fbc3-5d31-9842-a6b925645984
Homo sapiens
loom
874 MB
Not in ASAP Details
hca
sc
88ec040b-8705-4f77-8f41-f81e57632f7d::12f00891-79b8-59ae-8933-59d01c5702dd
Mus musculus
loom
877 MB
Not in ASAP Details
hca
sc
83f5188e-3bf7-4956-9544-cea4f8997756::6ac7031b-24be-5c19-b705-08a0cf4ad428
Homo sapiens
loom
878 MB
Not in ASAP Details
hca
sc
cae461de-ecbd-482f-a5d4-11d607fc12ba::219a44ec-307b-46e4-95b8-644518077b31
Homo sapiens
mtx
879 MB
Not in ASAP Details
hca
sc
c1810dbc-16d2-45c3-b45e-3e675f88d87b::0c603aee-2e55-5133-b58e-79fe82209065
Homo sapiens
loom
881 MB
Not in ASAP Details
hca
sc
925f9a4c-cac0-444a-ad2c-612656ab3a85::0d06d695-f350-4598-931c-bab1950b288a
Homo sapiens
h5ad
883 MB
Not in ASAP Details
allen_abc
sc
Macosko-10X-STR
Mus musculus
h5ad
883 MB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::ddb938a8-de33-5ad3-9e02-df4f291741f4
Homo sapiens
loom
884 MB
Not in ASAP Details
hca
sc
f2fe82f0-4454-4d84-b416-a885f3121e59::5c3d1e59-cae7-5f21-b925-9d27bf675a9e
Homo sapiens
loom
885 MB
Not in ASAP Details
hca
sc
c893cb57-5c9f-4f26-9312-21b85be84313::2d72e399-988d-554e-9520-e9ea5b6f1cbe
Homo sapiens
loom
887 MB
Not in ASAP Details
of 756