External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

2 – 11'441'407
Reset 18884 candidates
Source Dataset Matrix Format ASAP Actions
hca
sc
3089d311-f9ed-44dd-bb10-397059bad4dc::facc7de3-f75e-5efb-a8bf-d6644a0c88fc
Homo sapiens
β€” loom
930 MB
Not in ASAP Details
hca
sc
abe1a013-af7a-45ed-8c26-f3793c24a1f4::0f2bdf51-97c6-5892-b9e7-ad826dbf1321
Homo sapiens
β€” loom
930 MB
Not in ASAP Details
hca
sc
c4077b3c-5c98-4d26-a614-246d12c2e5d7::300ed20f-4a02-5246-b991-675e55f9563c
Homo sapiens
β€” loom
932 MB
Not in ASAP Details
hca
sc
5ee710d7-e2d5-4fe2-818d-15f5e31dae32::0c4fd2d6-781c-54c1-bfdb-a8c016723c75
Homo sapiens
β€” loom
933 MB
Not in ASAP Details
hca
sc
f2fe82f0-4454-4d84-b416-a885f3121e59::c5674446-c1fa-5509-a077-a296cf1df801
Homo sapiens
β€” loom
934 MB
Not in ASAP Details
hca
sc
87d52a86-bdc7-440c-b84d-170f7dc346d9::91adc4d3-475c-5566-8ef7-8fe51bad9d8d
Homo sapiens
β€” loom
935 MB
Not in ASAP Details
geo
sc
GSE330130
Homo sapiens
β€” h5ad
935 MB
Not in ASAP Details
hca
sc
5ee710d7-e2d5-4fe2-818d-15f5e31dae32::e67e1ced-3d1f-5b6d-9446-9763f90f1ef8
Homo sapiens
β€” loom
935 MB
Not in ASAP Details
hca
sc
e5d45579-1f5b-48c3-b568-320d93e7ca72::6ce35dae-424e-5979-9136-b8148a2d3cdf
Mus musculus
β€” loom
936 MB
Not in ASAP Details
hca
sc
5ee710d7-e2d5-4fe2-818d-15f5e31dae32::11d51f81-f7af-5f1e-ac14-a2a90d5392be
Homo sapiens
β€” loom
936 MB
Not in ASAP Details
hca
sc
3089d311-f9ed-44dd-bb10-397059bad4dc::3e8dce12-a86f-50fc-bf4f-0a31b52df9c8
Homo sapiens
β€” loom
937 MB
Not in ASAP Details
hca
sc
c41dffbf-ad83-447c-a0e1-13e689d9b258::c2d23477-173c-5940-8f18-e4f6bc432929
Homo sapiens
β€” loom
938 MB
Not in ASAP Details
hca
sc
c4077b3c-5c98-4d26-a614-246d12c2e5d7::ba04b4df-2927-5e8b-8090-ae9c6dd5bada
Homo sapiens
β€” loom
938 MB
Not in ASAP Details
geo
sc
GSE308920
Mus musculus
β€” rds
944 MB
Not in ASAP Details
hca
sc
abe1a013-af7a-45ed-8c26-f3793c24a1f4::615aea9b-2bc7-54b8-97c5-a16ac697f790
Homo sapiens
β€” loom
944 MB
Not in ASAP Details
hca
sc
1dddae6e-3753-48af-b20e-fa22abad125d::e53bb5cc-2dcf-4972-8ece-31ac8e28a8cd
Homo sapiens
β€” h5ad
944 MB
Not in ASAP Details
hca
sc
4c8e9d75-d85a-47de-9598-06549cf44b91::cc55ee6e-f24a-4dea-9662-8423beb35b12
Homo sapiens
β€” h5ad
945 MB
Not in ASAP Details
hca
sc
c4077b3c-5c98-4d26-a614-246d12c2e5d7::6ce4f7e4-8f04-5027-930f-bba9df22e225
Homo sapiens
β€” loom
946 MB
Not in ASAP Details
hca
sc
c41dffbf-ad83-447c-a0e1-13e689d9b258::18aa2975-5b43-55de-abeb-3ed80f04f422
Homo sapiens
β€” loom
947 MB
Not in ASAP Details
hca
sc
4e6f083b-5b9a-4393-9890-2a83da8188f1::d3ee9afc-d55c-5119-a897-9402ab47e83c
Mus musculus
β€” loom
949 MB
Not in ASAP Details
hca
sc
5b5f05b7-2482-468d-b76d-8f68c04a7a47::8172e86a-c7ec-5bb2-9229-b1d2f1306f5d
Homo sapiens
β€” loom
949 MB
Not in ASAP Details
hca
sc
c1810dbc-16d2-45c3-b45e-3e675f88d87b::28037a2d-d7ad-5c4b-905f-3d715b77613f
Homo sapiens
β€” loom
951 MB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::0c3e9696-776d-5887-8fae-7b1ee626b545
Homo sapiens
β€” loom
954 MB
Not in ASAP Details
hca
sc
c1810dbc-16d2-45c3-b45e-3e675f88d87b::8946d985-b158-5ae9-8e60-66538ffea80b
Homo sapiens
β€” loom
958 MB
Not in ASAP Details
hca
sc
f2fe82f0-4454-4d84-b416-a885f3121e59::82aef31f-b0b0-56de-adfc-c6085c65a1f3
Homo sapiens
β€” loom
959 MB
Not in ASAP Details
of 756