External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

2 – 11'441'407
Reset 18884 candidates
Source Dataset Matrix Format ASAP Actions
hca
sc
Single-cell survey of human lymphatics unveils marked endothelial cell hetero... Publication DOI
5ee710d7-e2d5-4fe2-818d-15f5e31dae32::e4ec3229-37c3-5ebb-b5a2-33224f2a5ca4
Homo sapiens
— loom
979 MB
 Not in ASAP Details
hca
sc
Colonic single epithelial cell census reveals goblet cell drivers of barrier ... Publication DOI
c893cb57-5c9f-4f26-9312-21b85be84313::1b3085ab-20c3-5d11-8b99-a4f144d02a1c
Homo sapiens
— loom
979 MB
 Not in ASAP Details
hca
sc
Resolving the fibrotic niche of human liver cirrhosis using single-cell trans... Publication DOI
c41dffbf-ad83-447c-a0e1-13e689d9b258::4f61fe4a-0a3d-5cb6-a1a2-55c013431b25
Homo sapiens
— loom
980 MB
 Not in ASAP Details
hca
sc
The emergent landscape of the mouse gut endoderm at single-cell resolution Publication DOI
4e6f083b-5b9a-4393-9890-2a83da8188f1::a141b01e-4fd9-547b-9555-7f29c70f5132
Mus musculus
— loom
980 MB
 Not in ASAP Details
hca
sc
Microglia Require CD4 T Cells to Complete the Fetal-to-Adult Transition. Publication DOI
e5d45579-1f5b-48c3-b568-320d93e7ca72::f31c92be-69d8-5635-bf03-875d8cf0dca8
Mus musculus
— loom
981 MB
 Not in ASAP Details
hca
sc
Characterization of the transcriptional landscape of human developing hippoca... Publication DOI
6c040a93-8cf8-4fd5-98de-2297eb07e9f6::535c2ca6-c7a3-55c0-b53f-f01bd57aeae9
Homo sapiens
— loom
981 MB
 Not in ASAP Details
hca
sc
Decoding human fetal liver haematopoiesis Publication DOI
f2fe82f0-4454-4d84-b416-a885f3121e59::7a8e04ed-f1cb-54e8-a2ac-bac140c49991
Homo sapiens
— loom
981 MB
 Not in ASAP Details
hca
sc
Single cell profiling of human induced dendritic cells generated by direct re... Publication DOI
116965f3-f094-4769-9d28-ae675c1b569c::98456966-43d1-5fa8-adca-fcaf50f70081
Homo sapiens
— loom
982 MB
 Not in ASAP Details
hca
sc
Transcriptomic characterisation of haematopoietic stem and progenitor cells f... Publication DOI
455b46e6-d8ea-4611-861e-de720a562ada::4d744e04-7dd1-5d89-85a1-1f0d2dc21afb
Homo sapiens
— loom
982 MB
 Not in ASAP Details
hca
sc
Reconstructing the human first trimester fetal-maternal interface using singl... Publication DOI
f83165c5-e2ea-4d15-a5cf-33f3550bffde::c54bc32f-f7c2-5b00-9764-339cf1926233
Homo sapiens
— loom
982 MB
 Not in ASAP Details
hca
sc
A Cellular Atlas of Pitx2-Dependent Cardiac Development. Publication DOI
7027adc6-c9c9-46f3-84ee-9badc3a4f53b::331016ac-fece-5306-a79e-4ae70443073c
Mus musculus
— loom
985 MB
 Not in ASAP Details
hca
sc
Single-cell survey of human lymphatics unveils marked endothelial cell hetero... Publication DOI
5ee710d7-e2d5-4fe2-818d-15f5e31dae32::679a3ceb-7131-5c91-91a3-3a43f147bcf8
Homo sapiens
— loom
985 MB
 Not in ASAP Details
hca
sc
Cells of the adult human heart Publication DOI
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::775fd56c-37df-5f67-884c-38de710f9a38
Homo sapiens
— loom
987 MB
 Not in ASAP Details
hca
sc
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer Publication DOI
3089d311-f9ed-44dd-bb10-397059bad4dc::1e73a0b9-c5d6-576d-89fc-f4feee5b282b
Homo sapiens
— loom
988 MB
 Not in ASAP Details
hca
sc
scRNA-seq assessment of the human lung, spleen, and esophagus tissue stabilit... Publication DOI
c4077b3c-5c98-4d26-a614-246d12c2e5d7::3756e03b-7295-5704-99c5-f587d9edc8e4
Homo sapiens
— loom
989 MB
 Not in ASAP Details
hca
sc
Single-cell survey of human lymphatics unveils marked endothelial cell hetero... Publication DOI
5ee710d7-e2d5-4fe2-818d-15f5e31dae32::4dd26573-86f3-564c-9780-4c6e98de8138
Homo sapiens
— loom
989 MB
 Not in ASAP Details
hca
sc
Cells of the adult human heart Publication DOI
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::00611f9e-984b-5ccf-9242-755238a8b0c2
Homo sapiens
— loom
990 MB
 Not in ASAP Details
hca
sc
Characterization of the transcriptional landscape of human developing hippoca... Publication DOI
6c040a93-8cf8-4fd5-98de-2297eb07e9f6::6f5ed13f-ed32-5f56-bcc6-75ef4bba5746
Homo sapiens
— loom
990 MB
 Not in ASAP Details
hca
sc
Cells of the adult human heart Publication DOI
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::0e388c8b-d923-5a93-a0b8-58495c2d68c8
Homo sapiens
— loom
994 MB
 Not in ASAP Details
hca
sc
scRNA-seq assessment of the human lung, spleen, and esophagus tissue stabilit... Publication DOI
c4077b3c-5c98-4d26-a614-246d12c2e5d7::70b31705-0a9c-57b4-a180-44c65ab3c7fc
Homo sapiens
— loom
996 MB
 Not in ASAP Details
hca
sc
Cells of the adult human heart Publication DOI
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::4694f14b-a2d0-5008-b326-4fac223c8005
Homo sapiens
— loom
997 MB
 Not in ASAP Details
hca
sc
Integrative computational analysis of the substantia nigra pars compacta and ... Publication DOI
5b5f05b7-2482-468d-b76d-8f68c04a7a47::c841abbe-e5f3-5e5e-8184-7226d70f8001
Homo sapiens
— loom
998 MB
 Not in ASAP Details
hca
sc
Cells of the adult human heart Publication DOI
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::9da2ddfb-3025-52a9-8f4c-26bdd7211b6b
Homo sapiens
— loom
999 MB
 Not in ASAP Details
hca
sc
Single-cell survey of human lymphatics unveils marked endothelial cell hetero... Publication DOI
5ee710d7-e2d5-4fe2-818d-15f5e31dae32::936ade27-f6a3-5fbf-9eec-406b01016d3c
Homo sapiens
— loom
1000 MB
 Not in ASAP Details
hca
sc
Cells of the adult human heart Publication DOI
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::ef4cfc22-2cbf-5617-8ad8-d904d4826150
Homo sapiens
— loom
1000 MB
 Not in ASAP Details
of 756