External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

211'441'407
Reset 18884 candidates
Source Dataset Matrix Format ASAP Actions
hca
sc
07073c12-8006-4710-a00b-23abdb814904::ce5a99b7-3ba2-5971-98e9-73bbc35ed49a
Homo sapiens
loom
3.32 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::48dea798-0cc6-50b1-a1ca-a63fc8e7233f
Homo sapiens
loom
3.33 GB
Not in ASAP Details
hca
sc
95f07e6e-6a73-4e1b-a880-c83996b3aa5c::f01d5e28-bfbe-5cb2-99ae-a00c9ebd1a22
Homo sapiens
loom
3.39 GB
Not in ASAP Details
hca
sc
4bec484d-ca7a-47b4-8d48-8830e06ad6db::9584fea1-e196-555e-8a49-ff536483e6a3
Homo sapiens
loom
3.4 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::17d1d2fa-6ae6-53b9-9d54-669ccaa0a0b7
Homo sapiens
loom
3.42 GB
Not in ASAP Details
geo
sc
GSE326014
Homo sapiens
h5ad
3.42 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::330c72c7-0ab5-5819-b1ca-bb9f68ff1ab9
Homo sapiens
loom
3.45 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::aa1e6d24-a37c-51ab-9171-1e50dce60e07
Homo sapiens
loom
3.46 GB
Not in ASAP Details
allen_abc
sc
Macosko-10X-MY-Pons-BS
Mus musculus
h5ad
3.51 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::c7de0935-189a-5c16-8f69-ee6bd1274e08
Homo sapiens
loom
3.56 GB
Not in ASAP Details
broad_scp
sc
SCP3339
h5ad
3.57 GB
Not in ASAP Details
hca
sc
a004b150-1c36-4af6-9bbd-070c06dbc17d::8979a5eb-c385-50f5-9b1d-ae8d9d0a4b7a
Homo sapiens
loom
3.58 GB
Not in ASAP Details
geo
sc
GSE304872
Homo sapiens
rds
3.58 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::f8b03afe-48e6-5a1c-9450-64208eec45f5
Homo sapiens
loom
3.59 GB
Not in ASAP Details
hca
sc
a004b150-1c36-4af6-9bbd-070c06dbc17d::c760d22a-c58d-563b-8752-e09dfbb1f067
Homo sapiens
loom
3.6 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::0996914c-2055-5d35-9d44-da3037ed4992
Homo sapiens
loom
3.62 GB
Not in ASAP Details
hca
sc
7027adc6-c9c9-46f3-84ee-9badc3a4f53b::5a606536-cd39-5269-b837-d17a9036d87c
Mus musculus
loom
3.65 GB
Not in ASAP Details
geo
sc
GSE304184
Mus musculus
rds
3.67 GB
Not in ASAP Details
hca
sc
4bec484d-ca7a-47b4-8d48-8830e06ad6db::f5d78030-40d7-5270-9fe0-392b8089454d
Homo sapiens
loom
3.72 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::86a7b881-392f-59bb-80ec-c7bc0c749b4c
Homo sapiens
loom
3.74 GB
Not in ASAP Details
allen_abc
sc
WMB-10Xv2-TH
Mus musculus
h5ad
3.76 GB
Not in ASAP Details
hca
sc
95f07e6e-6a73-4e1b-a880-c83996b3aa5c::b692f146-83e8-5031-ad37-7b7d5c594f8e
Homo sapiens
loom
3.77 GB
Not in ASAP Details
hca
sc
95f07e6e-6a73-4e1b-a880-c83996b3aa5c::2b5a9a88-7aa1-5915-a5eb-734bfc8a0a0d
Homo sapiens
loom
3.78 GB
Not in ASAP Details
hca
sc
4e6f083b-5b9a-4393-9890-2a83da8188f1::bf1047c1-0fff-53cd-9291-c9c714c010ba
Mus musculus
h5ad
3.78 GB
Not in ASAP Details
allen_abc
sc
WMB-10Xv3-PAL
Mus musculus
h5ad
3.79 GB
Not in ASAP Details
of 756