External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

211'441'407
Reset 18884 candidates
Source Dataset Matrix Format ASAP Actions
hca
sc
d3a4ceac-4d66-4984-9704-2570c0647a56::540f3b7a-e6b8-5444-9641-3c05f898965a
Homo sapiens
loom
3.81 GB
Not in ASAP Details
allen_abc
sc
Macosko-10X-MB
Mus musculus
h5ad
3.83 GB
Not in ASAP Details
hca
sc
74b6d569-3b11-42ef-b6b1-a0454522b4a0::6e63e10e-7a5f-52b8-9242-df9d169b802a
Mus musculus
h5
3.93 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::b76f6b10-d431-5557-8de4-7f8fdf13adfb
Homo sapiens
loom
3.96 GB
Not in ASAP Details
hca
sc
f2078d5f-2e7d-4844-8552-f7c41a231e52::46d3eaac-f0e1-4f4b-9c10-181fa613d78a
Homo sapiens
h5ad
4.06 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::506d39d1-f586-50b0-8824-f6d1d5aed704
Homo sapiens
loom
4.07 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::dc58c876-3de2-5264-b108-531d4e6c914a
Homo sapiens
loom
4.1 GB
Not in ASAP Details
geo
sc
GSE301830
Mus musculus
rds
4.13 GB
Not in ASAP Details
geo
sc
GSE312213
Rattus norvegicus
rds
4.14 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::fc9fe2b2-b2fb-5090-b896-8c360c4a9b94
Homo sapiens
loom
4.16 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::b3d95c8a-3cb5-56d8-b1ca-c6f8fe5d6b0f
Homo sapiens
loom
4.19 GB
Not in ASAP Details
hca
sc
07073c12-8006-4710-a00b-23abdb814904::b7470a21-9605-593c-b325-2e6085b540d7
Homo sapiens
loom
4.2 GB
Not in ASAP Details
hca
sc
c1810dbc-16d2-45c3-b45e-3e675f88d87b::ee40b2d1-1cb4-5f0e-8403-ba63817b83e7
Homo sapiens
loom
4.21 GB
Not in ASAP Details
hca
sc
ad98d3cd-26fb-4ee3-99c9-8a2ab085e737::27017b73-a7d2-57f3-98e0-d79152ba4208
Homo sapiens
loom
4.22 GB
Not in ASAP Details
hca
sc
c1810dbc-16d2-45c3-b45e-3e675f88d87b::1047c7a8-2e85-535d-96a1-837a26e2cd29
Homo sapiens
loom
4.22 GB
Not in ASAP Details
geo
sc
GSE302041
Arabidopsis thaliana
rds
4.26 GB
Not in ASAP Details
geo
sc
GSE313239
Homo sapiens
h5ad
4.35 GB
Not in ASAP Details
hca
sc
e0009214-c0a0-4a7b-96e2-d6a83e966ce0::7c7bd702-b485-524d-910f-4934458f0c76
Mus musculus
loom
4.37 GB
Not in ASAP Details
hca
sc
4bec484d-ca7a-47b4-8d48-8830e06ad6db::65b92b16-3e6c-5f6b-b174-5cfde2bb4fb9
Homo sapiens
loom
4.37 GB
Not in ASAP Details
hca
sc
95f07e6e-6a73-4e1b-a880-c83996b3aa5c::8c7ecf46-d173-53b3-808d-81102061f78f
Homo sapiens
loom
4.42 GB
Not in ASAP Details
allen_abc
sc
WHB-10Xv3-Nonneurons
Homo sapiens
h5ad
4.42 GB
Not in ASAP Details
hca
sc
95f07e6e-6a73-4e1b-a880-c83996b3aa5c::dd28b326-3294-5df5-8c3d-6bea4e50a6f2
Homo sapiens
loom
4.43 GB
Not in ASAP Details
hca
sc
95f07e6e-6a73-4e1b-a880-c83996b3aa5c::c70a8069-2af2-5cb6-a471-68a9ef8d8567
Homo sapiens
loom
4.48 GB
Not in ASAP Details
geo
sc
GSE329967
Mus musculus
rds
4.5 GB
Not in ASAP Details
geo
sc
GSE328175
Mus musculus
rds
4.5 GB
Not in ASAP Details
of 756