External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	PINK1 Deficiency Aggravates Age-related Bone Loss GSE281254 Mus musculus	2 samples	archive_table 240 KB	Not in ASAP	Details
geo bulk	Defining the mechanism of systemic NK cell dysfunction associated with melano... GSE248264 Mus musculus	2 samples	archive_table 240 KB	Not in ASAP	Details
geo bulk	Exploring the downstream genes of PKP2 GSE140509 Homo sapiens	2 samples	archive_table 240 KB	Not in ASAP	Details
geo bulk	CircPan3 Promotes the Ghrelin System and Chondrocyte Autophagy by Sponging mi... GSE186990 Rattus norvegicus	2 samples	archive_table 240 KB	Not in ASAP	Details
geo bulk	Single clonal glandular stem cells derived from human parotid glands do not a... GSE160439 Homo sapiens	2 samples	archive_table 240 KB	Not in ASAP	Details
geo bulk	Sex hormones control muscle stem cells GSE121016 Mus musculus	2 samples	counts_table 240 KB	Not in ASAP	Details
geo bulk	Discovery and Functional Characterization of Novel Non-Coding Variants in a C... GSE312998 Homo sapiens	2 samples	counts_table 241 KB	Not in ASAP	Details
geo bulk	Disturbed flow in the juxta-anastomotic area of an arteriovenous fistula corr... GSE249267 Mus musculus	2 samples	counts_table 241 KB	Not in ASAP	Details
geo bulk	RNA sequencing of human embryonic stem cell after sevoflurane exposure GSE148436 Homo sapiens	2 samples	counts_table 242 KB	Not in ASAP	Details
geo bulk	Next Generation Sequencing Facilitates Quantitative Analysis of Hedgehog Sign... GSE146223 Mus musculus	2 samples	counts_table 243 KB	Not in ASAP	Details
geo bulk	cGAS Suppresses β-cell Proliferation by a STING-independent but CEBPβ-depende... GSE264386 Mus musculus	2 samples	counts_table 243 KB	Not in ASAP	Details
geo bulk	CircSPI1 functions as an oncogene through antagonizing SPI1 and interacting w... GSE159931 Homo sapiens	2 samples	counts_table 246 KB	Not in ASAP	Details
geo bulk	Transcriptome of Ago1_KO mESCs GSE178920 Mus musculus	2 samples	counts_table 249 KB	Not in ASAP	Details
geo bulk	Gene expression changes in Ube2i-deleted mouse uterus on postnatal day 21 (PN... GSE315117 Mus musculus	2 samples	archive_table 250 KB	Not in ASAP	Details
geo bulk	Gene expression profiles of Control and FAK KO Th17 cells GSE298541 Mus musculus	2 samples	archive_table 250 KB	Not in ASAP	Details
geo bulk	OTUD3 prevents ulcerative colitis by modulating microbiota-mediated STING ac... GSE244076 Mus musculus	2 samples	archive_table 250 KB	Not in ASAP	Details
geo bulk	ABCG8-mediated sterol efflux increases cancer cell progression through LRP6/W... GSE287883 Homo sapiens	2 samples	archive_table 250 KB	Not in ASAP	Details
geo bulk	RNA-seq of dorsal root ganglia (DRG) neurons of dry skin (AEW) mice GSE217901 Mus musculus	2 samples	archive_table 250 KB	Not in ASAP	Details
geo bulk	Nanopore sequencing unveils the complexity of the murine brown adipose tissue... GSE212570 Mus musculus	2 samples	archive_table 250 KB	Not in ASAP	Details
geo bulk	Transcriptomics analysis of iron chelator deferoxamine treated human tumor co... GSE185738 Homo sapiens	2 samples	archive_table 250 KB	Not in ASAP	Details
geo bulk	RNA sequencing of high mobility group box 1-treated melanocytes [hmgb1] GSE216423 Homo sapiens	2 samples	archive_table 250 KB	Not in ASAP	Details
geo bulk	Role of human dural fibroblasts in the angiogenic responses of human endothel... GSE224999 Homo sapiens	2 samples	archive_table 250 KB	Not in ASAP	Details
geo bulk	Effect of 1,5-AG addition on gene expression in pre-B ALL cells. GSE215116 Homo sapiens	2 samples	archive_table 250 KB	Not in ASAP	Details
geo bulk	RNA sequencing of control and DAC-treated CT26 cells. GSE192744 Mus musculus	2 samples	archive_table 250 KB	Not in ASAP	Details
geo bulk	Cadherin-12 regulates neurite outgrowth through PKA/Rac1/Cdc42 pathway in cor... GSE183174 Rattus norvegicus	2 samples	archive_table 250 KB	Not in ASAP	Details