External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Transcriptional characterization of bacteria-fungi interaction between Priest... GSE179605 Priestia endophytica	2 samples	archive_table 250 KB	Not in ASAP	Details
geo bulk	Effect of ADGRF4 knockdown on gene expression pattern in A549 cells GSE153554 Homo sapiens	2 samples	archive_table 250 KB	Not in ASAP	Details
geo bulk	Transcriptional profiling of cells in the dorsal striatum of Drd1-TRAP (CP73)... GSE142142 Mus musculus	2 samples	archive_table 250 KB	Not in ASAP	Details
geo bulk	Analysis of signaling moelculs induced by UNE-C1 treatment GSE138488 Mus musculus	2 samples	archive_table 250 KB	Not in ASAP	Details
geo bulk	RNA-seq of CAL-62 cells transfected with LINC00886 smart silencer and negati... GSE214782 Homo sapiens	2 samples	counts_table 250 KB	Not in ASAP	Details
geo bulk	Transcriptome analysis of Paracoccus denitrificans following exposure to hexa... GSE181731 Paracoccus denitrificans	2 samples	counts_table 251 KB	Not in ASAP	Details
geo bulk	Chromatin-enriched RNAs expression profiling by high-throughput sequencing of... GSE236881 Homo sapiens	2 samples	counts_table 251 KB	Not in ASAP	Details
geo bulk	The second polar body contributes to the fate asymmetry in the mouse embryo GSE182918 Mus musculus	2 samples	counts_table 252 KB	Not in ASAP	Details
geo bulk	CLINICOPATHOLOGIC AND MOLECULAR ANALYSIS OF A BCOR-CCNB3+ UNDIFFERENTIATED SA... GSE188554 Homo sapiens	2 samples	counts_table 252 KB	Not in ASAP	Details
geo bulk	CD40 induces PIR-A+ macrophages to promote chronic rejection of cardiac trans... GSE239774 Mus musculus	2 samples	counts_table 252 KB	Not in ASAP	Details
geo bulk	Amplification of Germ Cells through Parthenogenesis Faithfully Maintain Genom... GSE154144 Mus musculus	2 samples	counts_table 253 KB	Not in ASAP	Details
geo bulk	Transcriptome-wide analysis of U2AF2 RNA binding in a human hematopoietic cel... GSE195669 Homo sapiens	2 samples	counts_table 253 KB	Not in ASAP	Details
geo bulk	Identification of the RNA-protein interactions of LRPPRC in A549 GSE204923 Homo sapiens	2 samples	counts_table 254 KB	Not in ASAP	Details
geo bulk	Escape from X inactivation is directly modulated by Xist non-coding RNA [ESC] GSE289901 Mus	2 samples	counts_table 257 KB	Not in ASAP	Details
geo bulk	The AKT2/SIRT5/TFEB pathway as a potential therapeutic target in non-neovascu... GSE269923 Mus musculus	2 samples	counts_table 258 KB	Not in ASAP	Details
geo bulk	Differentially expressed genes in smooth muscle cells following miRNA-146a ov... GSE112060 Homo sapiens	2 samples	counts_table 259 KB	Not in ASAP	Details
geo bulk	Effect of depletion of HNRNPC on multiple myeloma cells GSE226728 Homo sapiens	2 samples	archive_table 260 KB	Not in ASAP	Details
geo bulk	Epitranscriptomic cytidine methylation of the Hepatitis B viral RNA encapsida... GSE250105 Homo sapiens	2 samples	archive_table 260 KB	Not in ASAP	Details
geo bulk	Autonomous TGFβ signaling induces phenotypic variation in human acute myeloid... GSE150081 Homo sapiens	2 samples	archive_table 260 KB	Not in ASAP	Details
geo bulk	STAP-1 is Required for Maintenance of Leukemic Stem Cells in Chronic Myeloid ... GSE127984 Mus musculus	2 samples	archive_table 260 KB	Not in ASAP	Details
geo bulk	Genome-wide analysis of mouse glial cell gene expression by Sgk1 inhibition. GSE145490 Mus musculus	2 samples	archive_table 260 KB	Not in ASAP	Details
geo bulk	Transcriptional profiling of neurons in the dentate gyrus in a Lypd1-TRAP (OI... GSE141903 Mus musculus	2 samples	archive_table 260 KB	Not in ASAP	Details
geo bulk	Gene expression profiling of fetal liver-derived hematopoietic stem cells in ... GSE116896 Mus musculus	2 samples	archive_table 260 KB	Not in ASAP	Details
geo bulk	Transcriptional profiling of neurons in the ventral striatum of a Stard5-TRAP... GSE138223 Mus musculus	2 samples	archive_table 260 KB	Not in ASAP	Details
geo bulk	Transcriptomic characteristics of quiescent cells in human fallopian tube epi... GSE274309 Homo sapiens	2 samples	counts_table 262 KB	Not in ASAP	Details