External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	total RNA-seq from K562 (ENCSR882NWV) GSE219879 Homo sapiens	2 samples	archive_table 233 MB	Not in ASAP	Details
geo bulk	Meningeal lymphatics-microglia axis regulates synaptic physiology [ligation] GSE270428 Mus musculus	2 samples	archive_table 235 MB	Not in ASAP	Details
geo bulk	DCAF7 regulates hematopoietic stem cell function and differentiation through ... GSE279267 Mus musculus	2 samples	archive_table 235 MB	Not in ASAP	Details
geo bulk	total RNA-seq from WTC11 (ENCSR914ALB) GSE219903 Homo sapiens	2 samples	archive_table 236 MB	Not in ASAP	Details
geo bulk	Melatonin Synergizes with Prostaglandin E2 to Enhance YAP-mediated Regenerati... GSE293340 Mus musculus	2 samples	archive_table 238 MB	Not in ASAP	Details
geo bulk	RAMPAGE from heart (ENCSR000AGN) GSE87927 Homo sapiens	2 samples	archive_table 239 MB	Not in ASAP	Details
geo bulk	Stably-Inverted Apical-Out Human Upper Airway Organoids for SARS-CoV-2 Infect... GSE249570 Homo sapiens	2 samples	archive_table 242 MB	Not in ASAP	Details
geo bulk	Head-to-head preclinical treatment design prioritizes promising therapies for... GSE303054 Mus musculus	2 samples	archive_table 242 MB	Not in ASAP	Details
geo bulk	High-resolution analysis of parent-of-origin-allelic expression in Arabidopsi... GSE27292 Arabidopsis thaliana	2 samples	archive_table 242 MB	Not in ASAP	Details
geo bulk	Long read sequencing of nuclear RNAs from human coronary artery smooth muscle... GSE165445 Homo sapiens	2 samples	archive_table 243 MB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR325BJP) GSE219692 Homo sapiens	2 samples	archive_table 245 MB	Not in ASAP	Details
geo bulk	polyA mRNA RNA-seq from liver (ENCSR000CHE) GSE93463 Mus musculus	2 samples	archive_table 247 MB	Not in ASAP	Details
geo bulk	Gene Regulation Dynamics during the Cell Cycle uncovered by RNA velocity and ... GSE167609 Mus musculus; Homo sapiens	2 samples	archive_table 251 MB	Not in ASAP	Details
geo bulk	A novel t(5;7)(q31;q21/CDK6::IL3 in immature T-cell acute lymphoblastic leuke... GSE211170 Homo sapiens	2 samples	archive_table 252 MB	Not in ASAP	Details
geo bulk	Convergent evolution of complex regulatory landscapes and pleiotropy at Hox l... GSE62268 Mus musculus	2 samples	archive_table 256 MB	Not in ASAP	Details
geo bulk	Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering GSE296287 Mus musculus	2 samples	archive_table 258 MB	Not in ASAP	Details
geo bulk	small RNA-seq from GM12878 (ENCSR000AEJ) GSE78288 Homo sapiens	2 samples	archive_table 258 MB	Not in ASAP	Details
geo bulk	Induction of a torpor-like hypothermic and hypometabolic state in rodents by ... GSE228180 Mus musculus	2 samples	archive_table 258 MB	Not in ASAP	Details
geo bulk	polyA mRNA RNA-seq from liver (ENCSR000CHB) GSE93460 Mus musculus	2 samples	archive_table 263 MB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR591KOB) GSE219470 Homo sapiens	2 samples	archive_table 263 MB	Not in ASAP	Details
geo bulk	total RNA-seq from K562 (ENCSR264IXQ) GSE219652 Homo sapiens	2 samples	archive_table 264 MB	Not in ASAP	Details
geo bulk	total RNA-seq from CMP (ENCSR767VHR) GSE78669 Mus musculus	2 samples	archive_table 266 MB	Not in ASAP	Details
geo bulk	polyA mRNA RNA-seq from erythroblast (ENCSR000CHS) GSE90207 Mus musculus	2 samples	archive_table 268 MB	Not in ASAP	Details
geo bulk	RAMPAGE from metanephros (ENCSR000AGO) GSE87928 Homo sapiens	2 samples	archive_table 268 MB	Not in ASAP	Details
geo bulk	Biomechanical Stress–Mediated Mesenchymal Fibulin-1–WNT Signaling Regulates I... GSE210144 Sus scrofa	2 samples	archive_table 271 MB	Not in ASAP	Details