External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

2 – 11'441'407
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Source Dataset Matrix Format ASAP Actions
geo
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siRNA RNA-seq from K562 (ENCSR509YMP)
GSE88322
Homo sapiens
2 samples archive_table
475 MB
 Not in ASAP Details
geo
bulk
polyA mRNA RNA-seq from cortical plate (ENCSR000CGY)
GSE93457
Mus musculus
2 samples archive_table
476 MB
 Not in ASAP Details
geo
bulk
shRNA RNA-seq from K562 (ENCSR898ABR)
GSE178041
Homo sapiens
2 samples archive_table
479 MB
 Not in ASAP Details
geo
bulk
Identification of Neuronal RNA Targets of TDP-43-Containing Ribonucleoprotein...
GSE25032
Rattus norvegicus
2 samples archive_table
479 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from WTC11 (ENCSR771DEX)
GSE219716
Homo sapiens
2 samples archive_table
482 MB
 Not in ASAP Details
geo
bulk
siRNA RNA-seq from K562 (ENCSR626SFM)
GSE91927
Homo sapiens
2 samples archive_table
482 MB
 Not in ASAP Details
geo
bulk
siRNA RNA-seq from K562 (ENCSR312FIT)
GSE88181
Homo sapiens
2 samples archive_table
482 MB
 Not in ASAP Details
geo
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total RNA-seq from liver (ENCSR448MXQ)
GSE78391
Mus musculus
2 samples archive_table
487 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from heart (ENCSR584OSM)
GSE219445
Mus musculus
2 samples archive_table
487 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from K562 (ENCSR369MDF)
GSE219755
Homo sapiens
2 samples archive_table
488 MB
 Not in ASAP Details
geo
bulk
Episomal S/MAR-based replicons do not alter expression profile of host genome
GSE97725
Homo sapiens
2 samples archive_table
490 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from gastrocnemius (ENCSR640PLU)
GSE187729
Mus musculus
2 samples archive_table
491 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from heart (ENCSR795WFC)
GSE188016
Mus musculus
2 samples archive_table
492 MB
 Not in ASAP Details
geo
bulk
CRISPR RNA-seq from HepG2 (ENCSR234UAM)
GSE219606
Homo sapiens
2 samples archive_table
494 MB
 Not in ASAP Details
geo
bulk
polyA depleted RNA-seq from GM12878 (ENCSR000CQE)
GSE90244
Homo sapiens
2 samples archive_table
494 MB
 Not in ASAP Details
geo
bulk
4DNESLQDCU1A - Replicate experiments of RNA-seq on RUES2 differentiated to en...
GSE222304
Homo sapiens
2 samples archive_table
496 MB
 Not in ASAP Details
geo
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polyA plus RNA-seq from macrophage (ENCSR164XXE)
GSE176859
Mus musculus
2 samples archive_table
497 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from liver (ENCSR611PTP)
GSE78419
Mus musculus
2 samples archive_table
497 MB
 Not in ASAP Details
geo
bulk
RNA-seq of the fruits of Curculigo latifolia and Curculigo capitulata
GSE151377
Curculigo latifolia; Curculigo capitulata
2 samples archive_table
498 MB
 Not in ASAP Details
geo
bulk
Endocardium-to-coronary artery differentiation during heart development and r...
GSE214942
Mus musculus
2 samples archive_table
499 MB
 Not in ASAP Details
geo
bulk
shRNA RNA-seq from K562 (ENCSR016OIX)
GSE176653
Homo sapiens
2 samples archive_table
501 MB
 Not in ASAP Details
geo
bulk
polyA mRNA RNA-seq from kidney (ENCSR394YLM)
GSE93492
Mus musculus
2 samples archive_table
502 MB
 Not in ASAP Details
geo
bulk
4DNESVIKXE89 - Replicate experiments of RNA-seq on RUES2 differentiated to en...
GSE222306
Homo sapiens
2 samples archive_table
504 MB
 Not in ASAP Details
geo
bulk
small RNA-seq from smooth muscle cell (ENCSR250STJ)
GSE78351
Homo sapiens
2 samples archive_table
505 MB
 Not in ASAP Details
geo
bulk
total RNA-seq from gastrocnemius (ENCSR095VGF)
GSE187315
Mus musculus
2 samples archive_table
505 MB
 Not in ASAP Details
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