External catalog

Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

Reset 13988 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
Spatiotemporal analysis of human intestinal development at single-cell resolu... Publication DOI
e006d4e3-35fa-44b4-9981-09a66c4322e5
Homo sapiens
4'211 cells x 32'330 genes h5ad
51 MB
 Not in ASAP Details
hca
sc
Transcriptome-scale spatial gene expression in the human dorsolateral prefron... Publication DOI
7b393e4d-65bc-4c03-b402-aae769299329::dc30e9a5-9766-4c73-b640-87c2006c137d
Homo sapiens
4'226 cells h5
9.77 MB
 Not in ASAP Details
cellxgene
sc
82 years old female - Fresh PBMCs (1 day post-intubation) Publication DOI
8a554710-08bc-4005-87cd-da9675bdc2e7
Homo sapiens
4'232 cells x 32'393 genes h5ad
27.1 MB
 Not in ASAP Details
cellxgene
sc
Evolution of cellular diversity in primary motor cortex of marmoset - non-neu... Publication DOI
787138a6-a421-444e-8ae5-537c1842e70c
Callithrix jacchus
4'289 cells x 14'409 genes h5ad
21.8 MB
 Not in ASAP Details
cellxgene
sc
VLMC - MTG: Seattle Alzheimer's Disease Atlas (SEA-AD) Publication DOI
236baeda-5fdd-41bf-8e32-bae21ac7d435
Homo sapiens
4'328 cells x 35'483 genes h5ad
61 MB
 Not in ASAP Details
cellxgene
sc
Colon Publication DOI
4e74d843-8d7a-497a-918a-f079ef141b6d
Homo sapiens
4'329 cells x 16'849 genes h5ad
60.6 MB
 Not in ASAP Details
cellxgene
sc
Pooled human liver Visium data Publication DOI
80737241-54f7-45b9-b9ca-0ea55083fd67
Homo sapiens
4'333 cells x 30'304 genes h5ad
67.6 MB
 Not in ASAP Details
cellxgene
sc
Retina Publication DOI
af8b241a-c72c-4470-b1a4-80e7336c6ab6
Homo sapiens
4'335 cells x 19'989 genes h5ad
49.6 MB
 Not in ASAP Details
cellxgene
sc
A Single-Cell Transcriptional Roadmap of the Mouse and Human Lymph Node Lymph... Publication DOI
cfa3c355-ee77-4fc8-9a00-78e61d23024c
Homo sapiens
4'355 cells x 14'968 genes h5ad
208 MB
 Not in ASAP Details
hca
sc
Transcriptome-scale spatial gene expression in the human dorsolateral prefron... Publication DOI
7b393e4d-65bc-4c03-b402-aae769299329::0650499a-7b6c-4555-80ec-608ec469ef74
Homo sapiens
4'384 cells h5
8.82 MB
 Not in ASAP Details
cellxgene
sc
Healthy - Large Intestine (first trimester) Publication DOI
5ea56ccf-4662-4303-9d49-abc69b1c435a
Homo sapiens
4'419 cells x 35'461 genes h5ad
91.8 MB
 Not in ASAP Details
cellxgene
sc
Puck 'A0029_035' Publication DOI
6d0481a9-f87b-4a3c-86f6-b7252a7d5d9f
Mus musculus
4'420 cells x 29'286 genes h5ad
11.9 MB
 Not in ASAP Details
cellxgene
sc
Scipio-rep2 Publication DOI
79884ae5-e026-4d4a-858f-e807960bd4f7
Homo sapiens
4'425 cells x 14'798 genes h5ad
333 MB
 Not in ASAP Details
cellxgene
sc
Puck 'Puck_230714_29' Publication DOI
3f799eaf-c4e8-4bab-8941-31073eb2d446
Mus musculus
4'448 cells x 29'286 genes h5ad
11.7 MB
 Not in ASAP Details
cellxgene
sc
Skin of body - A single-cell transcriptomic atlas characterizes ageing tissue... Publication DOI
4fa55ee5-8da4-4d42-9525-1c52d4ce50bf
Mus musculus
4'454 cells x 17'943 genes h5ad
105 MB
 Not in ASAP Details
cellxgene
sc
Healthy - Large Intestine (second trimester) Publication DOI
5525b4bd-e4e1-49d2-8734-0e7e14c5515f
Homo sapiens
4'475 cells x 35'461 genes h5ad
85.4 MB
 Not in ASAP Details
cellxgene
sc
Healthy - Oral mucosa Publication DOI
2d9f953c-940f-43d4-b9cc-7ea371cefb4c
Homo sapiens
4'494 cells x 35'461 genes h5ad
65.4 MB
 Not in ASAP Details
cellxgene
sc
E9.0: Puck_220718_17 Publication DOI
09286690-98b5-4095-b0b1-3ded23a9dd3a
Mus musculus
4'507 cells x 27'368 genes h5ad
18.5 MB
 Not in ASAP Details
cellxgene
sc
E9.0: Puck_220718_16 Publication DOI
c459791b-a708-4118-9423-ecb79838eab9
Mus musculus
4'517 cells x 27'368 genes h5ad
19 MB
 Not in ASAP Details
cellxgene
sc
Astrocyte Publication DOI
989a76f9-2e03-48c4-ad04-550591470d85
Mus musculus
4'526 cells x 20'210 genes h5ad
45.3 MB
 Not in ASAP Details
cellxgene
sc
E8.5_rep2: Puck_220815_14 Publication DOI
7e1212a2-f4aa-49c9-ac5a-1dd5fd405a86
Mus musculus
4'562 cells x 27'368 genes h5ad
24.1 MB
 Not in ASAP Details
cellxgene
sc
66 years old female - Airway Wash (7 days post-intubation) Publication DOI
73b7d0aa-035f-4a15-9f1d-f56b70204591
Homo sapiens
4'594 cells x 32'393 genes h5ad
51.8 MB
 Not in ASAP Details
cellxgene
sc
49 years old male - Fresh PBMCs (1 day post-intubation) Publication DOI
c874f155-9bf9-4928-b821-f52c876b3e48
Homo sapiens
4'603 cells x 32'393 genes h5ad
54.8 MB
 Not in ASAP Details
cellxgene
sc
E8.5_rep2: Puck_220815_13 Publication DOI
9f670522-99d3-4e01-8fee-42f830b33f6b
Mus musculus
4'616 cells x 27'368 genes h5ad
25.5 MB
 Not in ASAP Details
cellxgene
sc
Mature kidney dataset: non PT parenchyma Publication DOI
2fc9c59f-3cfd-48d9-9b23-e369ea31bff3
Homo sapiens
4'620 cells x 32'088 genes h5ad
36.6 MB
 Not in ASAP Details
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