External catalog

Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

Reset 13988 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
Supercluster: Vascular Publication DOI
0d7f4c06-a6bd-47d2-a42b-3a7196704f77
Homo sapiens
9'932 cells x 58'232 genes h5ad
47.2 MB
 Not in ASAP Details
cellxgene
sc
Trophoblast_stemcells Publication DOI
ebaaa22f-fbaa-4a9c-aa62-b938a4e2d319
Homo sapiens
9'957 cells x 22'027 genes h5ad
208 MB
 Not in ASAP Details
hca
sc
Spatial multiomics map of trophoblast development in early pregnancy Publication DOI
aecfd908-674c-4d4e-b36e-0c1ceab02245::ac196b46-cbd8-44c9-9717-52aa256b3657
Homo sapiens
9'957 cells h5ad
752 MB
 Not in ASAP Details
cellxgene
sc
HTAPP-895-SMP-7359 scRNA-seq Publication DOI
494faa16-c42d-4b66-8667-f66a3bcacb01
Homo sapiens
9'958 cells x 24'763 genes h5ad
150 MB
 Not in ASAP Details
hca
sc
Dandelion uses the single-cell adaptive immune receptor repertoire to explore... Publication DOI
a83b7f45-bfb1-4c6a-97e9-8e3370065cc1::46be51ef-6c0e-4bc0-b3bd-dad6eaa37dc7
Homo sapiens
9'961 cells h5
35.3 MB
 Not in ASAP Details
cellxgene
sc
Puck 'Puck_240129_27' Publication DOI
75d9e10d-97ef-45aa-a589-2916a91d4848
Mus musculus
10'008 cells x 29'286 genes h5ad
21.8 MB
 Not in ASAP Details
cellxgene
sc
HTAPP-944-SMP-7479 scRNA-seq Publication DOI
cd6398a9-c0af-4467-9091-c536866535bd
Homo sapiens
10'016 cells x 25'146 genes h5ad
95.5 MB
 Not in ASAP Details
cellxgene
sc
thymus scRNA-seq atlas - smooth muscle cell subset Publication DOI
c3431f48-81bd-4d7b-9045-e43be7645883
Homo sapiens
10'019 cells x 35'477 genes h5ad
28.1 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Hypothalamus (HTH) - mammillary region of HTH (HTHma) Publication DOI
00476f9f-ebc1-4b72-b541-32f912ce36ea
Homo sapiens
10'099 cells x 58'232 genes h5ad
130 MB
 Not in ASAP Details
cellxgene
sc
Puck 'Puck_230517_23' Publication DOI
813e021e-07cb-4c0b-a390-91a161ccfd58
Mus musculus
10'109 cells x 29'286 genes h5ad
29.7 MB
 Not in ASAP Details
cellxgene
sc
Puck 'Puck_240129_31' Publication DOI
b97484b9-1b7b-4255-8851-9e4edb22291e
Mus musculus
10'148 cells x 29'286 genes h5ad
24.6 MB
 Not in ASAP Details
cellxgene
sc
Air-Liquid Interface cultures of human airway epithelium in 4 differentiation... Publication DOI
c69fb6cd-fc4d-4216-85cb-8d80e7771786
Homo sapiens
10'224 cells x 35'552 genes h5ad
165 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191112_08 Publication DOI
78d59e4a-82eb-4a61-a1dc-da974d7ea54b
Mus musculus
10'250 cells x 18'551 genes h5ad
4.22 MB
 Not in ASAP Details
cellxgene
sc
HPC region Publication DOI
95d3b0fb-b8a7-4bec-a2e8-cded3222ff07
Homo sapiens
10'268 cells x 32'344 genes h5ad
79.4 MB
 Not in ASAP Details
cellxgene
sc
Puck 'Puck_230810_08' Publication DOI
54223ce6-6bd4-4b37-a5ad-6a38fb801190
Mus musculus
10'269 cells x 29'286 genes h5ad
25.8 MB
 Not in ASAP Details
hca
sc
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19 Publication DOI
08fb10df-32e5-456c-9882-e33fcd49077a::91c30f46-99a9-447b-8256-899f484dcf8f
Homo sapiens
10'269 cells h5
20.2 MB
 Not in ASAP Details
hca
sc
Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia. Publication DOI
b91c623b-1945-4727-b167-0a93027b0d3f::6f39d2b8-3843-4f14-8aed-516418b01da0
Homo sapiens
10'335 cells h5
24.5 MB
 Not in ASAP Details
cellxgene
sc
Myeloid cells from human cardiac tissue with myocarditis and healthy controls Publication DOI
a49167b8-fe43-4b8f-ac37-d9c2af16f116
Homo sapiens
10'363 cells x 32'397 genes h5ad
268 MB
 Not in ASAP Details
hca
sc
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19 Publication DOI
08fb10df-32e5-456c-9882-e33fcd49077a::d2d0b982-af37-48a8-92bc-4e026a303821
Homo sapiens
10'366 cells h5
14.9 MB
 Not in ASAP Details
cellxgene
sc
Malignant cells for T-ALL patient P058 from original cohort. Publication DOI
1614cca1-2a40-48a6-a23c-c19f94b1d2c0
Homo sapiens
10'377 cells x 35'459 genes h5ad
223 MB
 Not in ASAP Details
cellxgene
sc
Mouse Germ Cells Publication DOI
5695d556-974e-4d92-9e99-5f61b8695313
Mus musculus
10'411 cells x 17'885 genes h5ad
181 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in the healthy human kidney: Puck_200205_17 Publication DOI
3bf0da2c-f0d7-4078-a152-d6a4f97ea43f
Homo sapiens
10'419 cells x 21'948 genes h5ad
15.7 MB
 Not in ASAP Details
cellxgene
sc
In vitro derived T cells, from Artificial Thymic Organoid protocol Publication DOI
8d73847b-33e7-48f0-837f-e3e6579bf12d
Homo sapiens
10'459 cells x 32'383 genes h5ad
120 MB
 Not in ASAP Details
hca
sc
Mapping the developing human immune system across organs Publication DOI
fcaa53cd-ba57-4bfe-af9c-eaa958f95c1a::a2bebd4b-9be2-49b0-a4e0-c3106cb7a6cd
Homo sapiens
10'459 cells h5ad
202 MB
 Not in ASAP Details
cellxgene
sc
Single nucleus transcriptomic profiling of human healthy hamstring tendon Publication DOI
06ef6b36-6c9b-4e10-8a94-d0baf274276e
Homo sapiens
10'533 cells x 22'909 genes h5ad
85.7 MB
 Not in ASAP Details
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