External catalog

Candidate datasets from CELLxGENE, Bgee, HCA, and GEO. Create an ASAP project from an entry that is not imported yet.

Reset 13988 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
Spatial transcriptomics in the healthy human kidney: Puck_200115_16 Publication DOI
dd49aae6-274c-4d8b-9bf6-025627fdf39e
Homo sapiens
14'495 cells x 25'066 genes h5ad
25.8 MB
 Not in ASAP Details
cellxgene
sc
Bone marrow - A single-cell transcriptomic atlas characterizes ageing tissues... Publication DOI
db55b719-6102-493a-9251-404bc501d0de
Mus musculus
14'517 cells x 21'025 genes h5ad
324 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191223_12 Publication DOI
4502562d-24da-4a95-a873-bdbf6834209c
Mus musculus
14'558 cells x 19'989 genes h5ad
15 MB
 Not in ASAP Details
cellxgene
sc
Immune cells from integrated dataset of 20 donors Publication DOI
2b868c88-eb35-492d-ba7d-4f2d0ff3ff33
Homo sapiens
14'656 cells x 36'166 genes h5ad
168 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_200127_09 Publication DOI
686e1a03-54e6-44ec-b9f5-98e3bd75560e
Mus musculus
14'666 cells x 19'290 genes h5ad
13.9 MB
 Not in ASAP Details
cellxgene
sc
E9.5: 201104_37 Publication DOI
77126551-868a-48de-ac09-480482518c91
Mus musculus
14'758 cells x 27'368 genes h5ad
88.5 MB
 Not in ASAP Details
cellxgene
sc
Adult bladder urothelial subset Publication DOI
8e5978bd-0e48-4a09-a92d-fa2985059f05
Homo sapiens
14'776 cells x 35'459 genes h5ad
332 MB
 Not in ASAP Details
cellxgene
sc
Individual Single-Cell RNA-seq PBMC Data from Guo et al. Publication DOI
ae5341b8-60fb-4fac-86db-86e49ee66287
Homo sapiens
14'783 cells x 17'222 genes h5ad
71 MB
 Not in ASAP Details
cellxgene
sc
Kidney Publication DOI
586f4422-94a9-4452-b90c-6278df433763
Microcebus murinus
14'855 cells x 16'400 genes h5ad
111 MB
 Details
cellxgene
sc
Human Endothelial cells 10x scRNA-seq Publication DOI
f5be4b96-f5a3-4c3d-84ac-6f69daf744d5
Homo sapiens
14'903 cells x 33'295 genes h5ad
91.7 MB
 Not in ASAP Details
cellxgene
sc
A Single-Cell Atlas of Mouse White Adipose Tissue - Mouse mesothelium Publication DOI
ac3a5f67-f02d-4e60-8d6f-093dcde05584
Mus musculus
14'947 cells x 24'551 genes h5ad
113 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191223_10 Publication DOI
9098fb44-ac81-4ac6-be8e-464f10ec7128
Mus musculus
14'961 cells x 19'121 genes h5ad
10.9 MB
 Not in ASAP Details
cellxgene
sc
UMAP of T-Cells cells Publication DOI
63bb6359-3945-4658-92eb-3072419953e4
Homo sapiens
14'970 cells x 32'383 genes h5ad
62.5 MB
 Not in ASAP Details
cellxgene
sc
Dissection: Hypothalamus (HTH) - preoptic region of HTH - HTHpo Publication DOI
64767efb-49b0-4562-a1bd-e619a5d9db41
Homo sapiens
14'979 cells x 58'232 genes h5ad
203 MB
 Not in ASAP Details
cellxgene
sc
Renal cell carcinoma, post aPD1, lung metastasis Puck_200727_09 Publication DOI
9b1437bb-42fe-47d8-8962-835d95581763
Homo sapiens
14'990 cells x 24'326 genes h5ad
14.2 MB
 Not in ASAP Details
cellxgene
sc
Dendritic cells Publication DOI
a1058181-73af-4436-ba0a-9e3925d1f1c7
Homo sapiens
15'063 cells x 22'144 genes h5ad
255 MB
 Not in ASAP Details
cellxgene
sc
Major cell cluster: Megakaryocytes Publication DOI
a50a1f5e-3f8b-42b2-a3b9-d068b0309298
Mus musculus
15'129 cells x 45'525 genes h5ad
207 MB
 Not in ASAP Details
cellxgene
sc
E2f7 knock-out mouse tracheal epithelial cells at air/liquid interface for se... Publication DOI
5584e9bf-1ff4-4a7d-84b8-d8e427713da5
Mus musculus
15'139 cells x 30'146 genes h5ad
332 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in mouse: Puck_191112_13 Publication DOI
b020294c-ab82-4547-b5a7-63d8ffa575ed
Mus musculus
15'161 cells x 17'569 genes h5ad
4.49 MB
 Not in ASAP Details
cellxgene
sc
AmyG region Publication DOI
f3c49918-4707-4d92-bb6d-2b5b4eb9d1b4
Homo sapiens
15'177 cells x 32'344 genes h5ad
132 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in the healthy human kidney: Puck_200115_12 Publication DOI
df4f1358-4a19-44f5-b136-bc7274c29789
Homo sapiens
15'196 cells x 24'847 genes h5ad
35.2 MB
 Not in ASAP Details
cellxgene
sc
Spatial transcriptomics in the healthy human kidney: Puck_200115_17 Publication DOI
d98ea49e-b70d-4434-b850-bbe217c9b66e
Homo sapiens
15'216 cells x 25'903 genes h5ad
26.9 MB
 Not in ASAP Details
cellxgene
sc
UMAP visualization of all 12 datasets Publication DOI
de94c504-4b58-4f42-b68d-74a8e4892f0e
Homo sapiens
15'243 cells x 30'172 genes h5ad
132 MB
 Not in ASAP Details
cellxgene
sc
Renal cell carcinoma, post aPD1, lung metastasis Puck_200727_10 Publication DOI
cc43509e-8729-4cbc-ace9-f0f7d654ee53
Homo sapiens
15'366 cells x 25'092 genes h5ad
17.7 MB
 Not in ASAP Details
cellxgene
sc
Major cell cluster: Ependymal cells Publication DOI
8bf44fc5-f1a0-419d-a71c-760fd9b813e8
Mus musculus
15'396 cells x 45'525 genes h5ad
223 MB
 Not in ASAP Details
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